FMO06452.5prime Sequence
1160 bp (997 high quality bases) assembled on 2008-09-15
> FMO06452.5prime
CAGTCGACATGTACAGTAGCAGCTTGCTGCCGGATCCGGCTGTCTATCAG
CCGGACACCCTGGACCTGAACACGGATGGAAAGGCGGCGGATTACTGGTT
CAACTGCTTCCGCGACATGGTGGCCAAGTTCGCGAAGGTGGCGGCCAAGT
CACAGGAGGAGGATCACACGGCCACCCAGCGGGCGGAGCAGTTCCAGGCG
GCGTATCTGCAGCGGCTGGAGGAGCACCAGCGTAATGTGCCAGTCAACAA
GGGCAAGGTGATTCTAGGCACCAGTGAGCTTCTCAAGCTAAACGAAACCC
TGTTGCGCCGCTACGGATTTACAGATCCCTGGCTGAGACAAAAGAGGCTG
GAAAATGCATCGGCTGTTGCCCGCCTGAAGCAGCGTCTGCAGGAATTGGA
TGCCCTGGCGGATGAGGACACAAGGTGGACGGAGCTGGTACGCGGTGTCC
TCGCCGGCAACATGTTTGACTGGGGCGCACAGGCCATATCTAACATACTG
GAGCAGGACAGCAATTTCGGACTTCATTCAGCCCTGGATCGCATTGAGAA
GCGACCCTGGTTGCTTGACAACCTGGACAGCTGGTTGAATCGCCTCAAGG
GCGAGCCACACAAGTGCGCCGTGGTCTTTGTGGACAACAGCGGCGTGGAT
GTGGTTCTGGGTGTGCTTCCCTTTGTCCGTGGACTGCTGAAACGTGGCAC
CAAGGTGCTGCTCTGCGCCAACAGTGAACCTGCTCTAAATGATGTGACCA
GCGAGGAGCTGAAATCCTTGCTGGACGACTGCTCGCGCGAGTGTGAGGTC
CTGGAGCAAGCCTGGTCAAGGACAACTACTGTTCTATGCAAATGGACAGA
CTGGTCCCTGGCTGGATATGCGCACTCTCCCAAGGAGCTGTGCGACGCCA
TCGCCGCTATGAGACTGACCTGCTTGTGATTGAGGGCATGGGACGCGCCT
TGCACAACAAATCTGAATGCCCGCTTGCTGCAGAACCATCAGTTGGCCTG
TGAATAAAAACAAATGGCTGGACAAGTACCTGGGCGGGCAAGATATATGT
TCGCCGTCGCTGCAAGTTCGAACCGGCGTGCCCCCAGCGCAAGCCTTTCT
AGACCATCCGTTTGGGCGCGCCGGGCCAGGATAATGGGTCTAAATCTCAT
ATTCCATAAT
FMO06452.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5828-RB | 1935 | CG5828-RB | 131..1213 | 9..1088 | 4910 | 97.5 | Plus |
| CG5828-RA | 1428 | CG5828-RA | 95..1177 | 9..1088 | 4910 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5094106..5095178 | 9..1077 | 4685 | 97.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:05:43 has no hits.
FMO06452.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:36 Download gff for
FMO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 88..1177 | 1..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:56:06 Download gff for
FMO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 79..1168 | 1..1088 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:41:59 Download gff for
FMO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5828-RA | 88..1177 | 1..1088 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:41:59 Download gff for
FMO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5094099..5095188 | 1..1088 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:36 Download gff for
FMO06452.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5094099..5095188 | 1..1088 | 97 | | Plus |
