FMO06456.5prime Sequence
1086 bp (966 high quality bases) assembled on 2008-09-15
> FMO06456.5prime
CAGTCGACATGAGAATAAGAACTAGCCTTTTGGCAGTTGTACTGCTGGCC
ACCGCCTCCTTGGCCGAGGAATCCAACTGGGGAAATGAGTGGGCGCCCAT
GGAGGATGCCATGCCCAGTCGCCGATCTGTCGATACCAAGCCCGCCGAAC
AAGCTGACATTCAGGGACGTTACCTCGTCCACGAGTCCATCCAGAGCAAC
AGCACCACCCAGATTGACGAGGTCATCGAGCAGCTGATCAATTCCCGCCG
TGAGGGTCGTAATCTGGGGGAATACGATGCCGTCTATGCTGATGGCAATA
TCGATCAGGCTCTGCAGCAGGGAAACGATATGCAGGCCCGCAATCTTATC
CGGGATAAGCTGTGTGGATTGGGACTGATGAGCTGCGATGTGGAGGAGAA
GCGTCCCTTCTACTCGACCATCTATGCCCAGGGTCCCCCACCACCATCTG
GTTTCAGCGGTGGTCCCTATGGTCCGGCTAAGCCCATGCCCCCACCAAGC
TACTTCAGTGGTCGTCCACCAATGGGTGGACCTCCTGGATCTTACGGACC
TCCGCCAAGCTCCCTGAACTCCTTTGGACCTCCGCCCAGCTCCGTGAACT
CCTTTGGACCGCCAAGGAAGGTGGGATACGAGGGACCATACAAGCCAATG
TCTGGACCTTACAGGCCATCTGGACCCGGTGGCTACCTGGAGCATCCTCC
ACCATCCGCCATTGACGGTTCATCCGACGGTATCACCTACACAAAGCCAC
CACCCGGAGCCCTGATCTATGACAGCAGCCACCAGGACCCATCTACACGG
AGGTCCTTCTCTGGAGCTGGACCCGTTTTTACTGGTGCTTCGATGGAGTT
CCTCCATACAACTACGAGACCCCGAGGGTGGCATCCAGGTGCAAGCTCTG
CTCCAATGGTTTTCTACTCGCAGCAGTCTTCAGCTTCTTCGCCTCGCCAC
ATCTTCAGCACAAAGTGATGTTGAGCACCGTCGATGGTTGCAGCACATGT
CATCATCTTATTCCATGTTGAGTGGCAGGAGCAAGGTTCAGTGCAATCCA
TCGGGACTGCGACCTTAAACGAATTCATGCCTTGTC
FMO06456.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4998-RB | 4192 | CG4998-RB | 155..1185 | 9..1021 | 4585 | 97.6 | Plus |
| CG4998-RA | 3310 | CG4998-RA | 155..1185 | 9..1021 | 4585 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16340444..16341381 | 9..940 | 4300 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:20:51 has no hits.
FMO06456.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:36:57 Download gff for
FMO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4998-RA | 148..1130 | 1..973 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:56:12 Download gff for
FMO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4998-RB | 152..1134 | 1..973 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:57 Download gff for
FMO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4998-RA | 148..1130 | 1..973 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:57 Download gff for
FMO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16340437..16341396 | 1..953 | 98 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:36:57 Download gff for
FMO06456.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16333537..16334496 | 1..953 | 98 | <- | Plus |
