FMO06470.5prime Sequence
1155 bp (1007 high quality bases) assembled on 2008-09-15
> FMO06470.5prime
CAGTCGACATGTCGGTGTCCTGGTCGAAGACTTTCGCGGCATTCACCGTC
GCCTGGCTCAGTGCCCTGTGCCTGCTGCCCGTGGAGACATTCTGTGACAC
CTCCTACTACGAGAAGTACTACGCGGCGCGGCGCTATGTGCCCCTCAAGC
GAAATGCTCCGCTGGTCTTCAACTTTACCCTAACGCTGCCGGATGCGGAT
CAACTGGCGTCCTTCGAGCGGCCCGCCCTGGTGGGCAATCTGCCAGTGCT
GGGCGCCTGGCAAGCGGGACGCGCTGTGCTCCTCAACCGCACTGCAATCC
TGAATGTTTGGAGCGCCTCCGTGGAGATACCGCAAAACAGCAGCGTTGAG
TATCGCTACTTTGCCGCCGCCGTTGGCCAGAGTGGAGCCGTGCAGATTCG
CCGCTGGGAGTCGCATGTCCAGGCAAGGACCTTTAATACCACCAAGTTCA
GTGGCAATCGCAGCGATGAGTTCGGACTCATTGGCAATGAGCGCCAGTTG
TCGCGTGGCTGGCTTCAGGACTCGGGCAACATTCTGCAGTTGAAGCTCTT
CCGCGAGGCTCTGAGCTTGGAGGAGCAACCGGAGGTGGGGCAGGAGAAGC
TGCGTCTGCGTTTGCAACCAGTAGATCCAAAGACTCTAGCGCCCATCCTA
AGTTCGGCACGTGCCAATGTGGAGTACGTGCGAATGGCGTACGGTGACAG
TAAGCTGCGGGTGCAGCCGGAGTACGGAGTGCCCTACGCCACCGGTGACA
TCCTCATGTTCATGTGAACCTGGAACAGCTGGATCGAGTGGCCTATCTGG
TGGAAGTTTATGCCGAACAACCGGATGAGACCTGGTCCGTCTCCTAGGAT
ACTCGCACCTGCTGCACACCTCGTTCTCCGGCACTGAAGGCGATGTGTCC
ATCGACCTATTTCGCGCTCTGGCAGCGCGTGGTGGGTCAACTGCGTATGA
GTACCTGCACATTCCGCCCATGAGAAGATGGCTCGATCTGCGCACCAGCT
CCGCCAACTACTGCCGCTCCAATGGACAAGCCCTGGAAGATTGGCAATCG
GGAATTGGGAAATCTCTTACGGTACACCACGAAATGCGCCTCCGCCTTAC
AGAGACCCCGATGGCCCACATGCTGGCTCCCTGAATGGCGCTAAATCCGG
GAATG
FMO06470.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:06:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9394-RB | 2134 | CG9394-RB | 35..1172 | 6..1136 | 5095 | 97.4 | Plus |
| CG9394-RA | 2312 | CG9394-RA | 213..1350 | 6..1136 | 5095 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:06:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21118606..21119681 | 6..1073 | 4750 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:06:17 has no hits.
FMO06470.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:43:24 Download gff for
FMO06470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9394-RA | 211..1317 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:56:15 Download gff for
FMO06470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9394-RA | 211..1317 | 1..1105 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:35 Download gff for
FMO06470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9394-RA | 211..1317 | 1..1105 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:35 Download gff for
FMO06470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21118604..21119710 | 1..1105 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:43:24 Download gff for
FMO06470.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17006109..17007215 | 1..1105 | 97 | | Plus |
