Clone FMO06475 Report

Search the DGRC for FMO06475

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:64
Well:75
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCyt-c-p-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06475.5prime Sequence

350 bp (350 high quality bases) assembled on 2008-09-15

> FMO06475.5prime
CAGTCGACATGGGCGTTCCTGCTGGTGATGTTGAGAAGGGAAAGAAGCTG
TTCGTGCAGCGCTGCGCCCAGTGCCACACCGTTGAGGCTGGTGGCAAGCA
CAAGGTTGGACCCAATCTGCATGGTCTGATCGGTCGCAAGACCGGACAGG
CGGCCGGATTCGCGTACACGGACGCCAACAAGGCCAAGGGCATCACCTGG
AACGAGGACACCCTGTTCGAGTACCTGGAGAACCCCAAGAAGTACATCCC
CGGCACCAAGATGATCTTCGCCGGTCTGAAGAAGCCCAACGAGCGCGGCG
ATCTGATCGCCTACCTGAAGTCGGCGACCAAGGCAAGCTTTCTAGACCAT

FMO06475.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:57
Subject Length Description Subject Range Query Range Score Percent Strand
Cyt-c-p-RB 634 CG17903-RB 40..363 9..332 1620 100 Plus
Cyt-c-p-RA 681 CG17903-RA 87..410 9..332 1620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16722050..16722373 9..332 1620 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:49:56 has no hits.

FMO06475.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:14 Download gff for FMO06475.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyt-c-p-RA 83..413 1..336 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:56:40 Download gff for FMO06475.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyt-c-p-RA 141..471 1..336 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:37 Download gff for FMO06475.5prime
Subject Subject Range Query Range Percent Splice Strand
Cyt-c-p-RA 83..413 1..336 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:37 Download gff for FMO06475.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 16722046..16722376 1..336 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:14 Download gff for FMO06475.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16722046..16722376 1..336 98   Plus