FMO06479.5prime Sequence
805 bp (805 high quality bases) assembled on 2008-09-15
> FMO06479.5prime
CAGTCGACATGGCCACAAACGAGAGCTGCAAGCACTTCAGGGAGCTGGTC
GTCGAACAGCGTTCTGGGCTGCTCCACATACGCTTCCAGCGGCGCTGGCA
ACGCCGAACCCTCTACGAGCTGATGCGCGCCCTGGACCTGGCGAGTGCAG
ACGCCGCCGTTAAGGTGGTCGTGCTCTCGGGCGAGTTTTCTGCAGCATGT
GGCGGTGAGATGGAACCGTTGGCTCTCAAACAGGGTCTGGAGAATAGGAG
TAGGCGTACCGCTTCCCACGAAGAAGCTGTGGGCAGTGGTGATGCCGAGG
AGCAGTACATCCATGAGAAGGCGGCCAATTTTGTGATGCGCTCGCTGGCC
AAGAAGCTGCTTGTGCACCGCAAACTCCTAGTGGCTTTTGTGGAGAGGCA
GTGCGTCGGTCTGGGCCTGAGCGTGTGCAGCCTGTGCGATCTGGTCTTCG
CAACGGAGTTATCTGCCTTTGTGCCCGCTTTCTCGCACCTGGATCCCTGC
ACCAAGGTGGGTCCCGGCTGGACTGTGCCACACGTCCACTGGCTGCTTCG
TCTGGGCGATCAAGCGAGCTCCAGCATTGCCCTCCAGTGTGGCCTTGTGG
CCAGTGTGGTGCGAGAGCCGCAGGAGTTTTGGCACCGCGTCGACCAATAC
TTGCGCTTGCCTTCCGCCTCCCTGTTGGCGACAAAGCGCCTCCTGTTTCG
TCCCTGGCAGACTCCCTCTTGGCCGAATTGCGCGAGGAGGGCACTCCGCT
GGCTGCGCAGCGACGCCGCTTGGCCAGATCCTCGCTGGCAAGCTTTCTAG
ACCAT
FMO06479.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14787-RA | 870 | CG14787-RA | 32..811 | 9..787 | 3875 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1460866..1461645 | 787..9 | 3850 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:52:48 has no hits.
FMO06479.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:42 Download gff for
FMO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 27..818 | 1..795 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:56:46 Download gff for
FMO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 18..809 | 1..795 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:08 Download gff for
FMO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14787-RA | 27..818 | 1..795 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:08 Download gff for
FMO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1460859..1461650 | 1..795 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:42 Download gff for
FMO06479.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1354892..1355683 | 1..795 | 98 | | Minus |
