FMO06487.5prime Sequence
1176 bp (1046 high quality bases) assembled on 2008-09-15
> FMO06487.5prime
CAGTCGACATGGCCCACTACAAAGGTGCCGCCAGCGAGGCGGGCCGTGCA
GCCCAGCTGATGAAGAAGCGGGAGATCCAGCAGCAGGAGATCGAGTTTCG
CAAGAAGAAGATCGAGGAGGAGCTCAAGCTGGACAAGATTGAGAACAAGT
TTGCCACCCACTACGATGCCGTGGAGCAGCAGCTCAAGTCCTCGACCATT
GGTCTGGTCACCCTCGACGAGATGAAGGCCAAGCAGGAGGATATAGTGCG
GGAACGGGAGAAGAAGCTCGCCCAGAAGAAGGACGAAAAGGATCGGGAGA
AGCAGCGCGCCCTGGAGGCCATTCAGGCGGAGAAGAACAAGCAGAAGCGG
CAGATCCAGGCGCTGTCCTTCAACCTGGACGACGACGAGGAGGAGGAGGA
GGAGGACGACGAGGATCACGATAAGAAACAGCTGAAGATTAAGCAGGAGG
ATCAGCCCAAGCCCAAGTGGACGGAGATCAAGGAAGACATTTTGCCCATA
AAGAAGAAGAAGATATGCAAGAATCCTGACGTGGACACTTCCTTTCTGCC
AGATCGCGAGCGCGAGGAGCAGGAGAACAGACTGCGCGAGCAGCTGCGTC
AAGAATGGGTAATGCAGCAGGCGGAGCTGAAGGACGAGGACATCTCCATC
ACGTTCAGCTACTGGGATGGCTCCGGCCATCGGCGGAACGTGCTGATGAA
GAAGGGCAACTCCATCTACCAGTTTCTGCAGAAGTGCCTGGAGCTGCTGC
GCAAGGAGTTCATCGAACTGAAGACCGTAATGGCCGACCAGCTGATGTAC
GTCAAGGAGGATCTGATCCTGCCGCACCACTATTCCTTCTACGACTTTAT
CGTGACCAAGCACGCGGCAAATCCGGCCCGCTCTTCCAGTTCGACGTCCA
CGACGATGTGCGCATGATAAGCGACGCCTCCGTGGAAAAGGAGGAGTCCC
ATGCCGGAAAGGTCTCCTCCGCTCTGGTACGAGCGCAACAGCACTTCTTC
CCAGCCAGCGATGGGAGCCCTACGATCCACCAGTCTAGACAGTCACATCA
AGACAAGATAGAGTTAAAAGCAGCTTTCTAACATTCGTTGGCGCGGGGCC
CAGTAATGGTCATACTAACTATCAATCATATCAACTAGCTAGAAATCTGC
CTGACTAGGCTGGATTTCAAAATAAA
FMO06487.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12259-RA | 1246 | CG12259-RA | 96..1120 | 9..1028 | 4970 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27919970..27920994 | 1028..9 | 4845 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:45 has no hits.
FMO06487.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:27:38 Download gff for
FMO06487.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12259-RA | 93..1137 | 2..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:56:56 Download gff for
FMO06487.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12259-RA | 75..1119 | 2..1041 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:24 Download gff for
FMO06487.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12259-RA | 93..1137 | 2..1041 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:24 Download gff for
FMO06487.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27919953..27920997 | 2..1041 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:27:38 Download gff for
FMO06487.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 23745675..23746719 | 2..1041 | 98 | | Minus |