FMO06490.5prime Sequence
1119 bp (878 high quality bases) assembled on 2008-09-15
> FMO06490.5prime
CAGTCGACATGCAGGAGCAGGAGATGGAGGTGGAAGTGGGGGACCCGGCA
AAGGCGTCGAATTTGCTGCGGCTCATCAAGCAGCTGCTGCTGGAAAAAGC
TTACGATGGCGTGCGGATGTTGTTTCAAAGTGCCCAGGAATCGGAAAAGA
ACACTCGGCTGCTGCCCCACATAGCCATGGATCTATACCATGACGTGTGC
TTGGAAAACATTTCCGACGAGGTGAACTCCCAGGAGCCAGAACTATTCGA
CTGCTCTGACGAGCTGCTCAAGCTGCTGGCCAAGTACGCCCCACTGCATG
AGCTTATGCTGGAACTGATGGAGCGCTTGGAAGAGAGTAGCAGTATCAAT
GTGTTCGGCGCCTATCTGCGGGCCCTACAAGTTGTGCTGCAGCGACAGGG
ACGCGACAAGCCGCAGGCCGTTGAGTGGAGCCTGAATAGCATCTTCACCC
ATCTCAAGGATTTGCCCCTGCCCGAATACCTCTCCGAGGGCTATGACGAG
GCCCAAGCGCGACTCATAGAGCAAAACGAACAGGTGGAGGACCTTCTGGC
TCACTACATCACCGTGGGACTCTTTCGGGAGCCGCTCCGCGATGAAATTC
TGCAGCAGGATGTGCGGACACCCAGCCAAATATTCAGGGATTGCGGCGTC
AACCGGCGCAACATATTCACTTGCTTCTTCATTCAGCTGTTGGGACGTCC
GTTGGCCCTGCTGGAGATGAATCACGCCAAGGAGGACCTTACGAGATCCT
ACGTGCAGCAAGTTACGGAAAGCCTGACTCAGATGCCAACCAGTTCCTGG
GGGATCCCTTCTACCTGCTCAACCTCGTGGAACAGCGTGCCAGATGGCTA
AGGAACTAGATGCCTCGAGAGGCGTCTACTAGATGAGTTGCCAAATGTTT
CCTCATCGAGGAGAAACTGCCGCTGCATGCTGTACCATGTACTATCACTC
GCTGTTCGTGGGTAACCACTGCCCACAAACGCACCAAAGGTATATGGACT
TTATTCCTATTCGAAACGATTTGTCTATTTGGCTGAAATGGCTATTCAGG
CACCAGTACCTCCCCTACAAATTGGGGCTCAGAATCTGGACATCTATTGA
ATCCCTGCACCACCTCGTT
FMO06490.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30496-RA | 2379 | CG30496-RA | 143..1210 | 9..1070 | 4965 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7699642..7700709 | 9..1070 | 4715 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:21:00 has no hits.
FMO06490.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:04 Download gff for
FMO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30496-RA | 143..1220 | 9..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 13:57:01 Download gff for
FMO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30496-RA | 139..1216 | 9..1080 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:02 Download gff for
FMO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30496-RA | 143..1220 | 9..1080 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:02 Download gff for
FMO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7699642..7700719 | 9..1080 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:04 Download gff for
FMO06490.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3587147..3588224 | 9..1080 | 97 | | Plus |
