FMO06510.5prime Sequence
363 bp (363 high quality bases) assembled on 2008-09-24
> FMO06510.5prime
CAGTCGAACATGCTACTTTTAAATAAAAACCGAGTGATTTCTTTGGTCGT
TAATTTTATTTTTCTTATCATTCTCATTTCATCGAGTGTCCAAGCGGATG
AGAGAAACATTAACAAGCTGCTGAACAACCAGGTGGTGGTCAGCCGCCAG
ATTATGTGCATCCTGGGCAAGAGCGAATGCGACCAACTGGGACTTCAACT
CAAAGCTGCCCTGCCAGAAGTTATAACCAGGAAATGCAGGAACTGCTCCC
CACAACAGGCTCAAAAAGCGCAAAAGCTGACCACATTTCTGCAAACTAGA
TACCCGGACGTATGGGCCATGCTTCTAAGGAAGTACGACAGTGCCGCAAG
CTTTCTAGACCAT
FMO06510.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30172-RB | 756 | CG30172-RB | 263..598 | 10..345 | 1680 | 100 | Plus |
| CG30172-RA | 431 | CG30172-RA | 38..373 | 10..345 | 1680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24030970..24031165 | 205..10 | 980 | 100 | Minus |
| 2R | 25286936 | 2R | 24030704..24030845 | 345..204 | 710 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 21:36:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 774..815 | 79..38 | 102 | 71.4 | Minus |
FMO06510.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:21 Download gff for
FMO06510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30172-RA | 38..376 | 10..349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:37:52 Download gff for
FMO06510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30172-RA | 37..375 | 10..349 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:41 Download gff for
FMO06510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30172-RA | 38..376 | 10..349 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:41 Download gff for
FMO06510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24030700..24030843 | 206..349 | 98 | <- | Minus |
| 2R | 24030970..24031165 | 10..205 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:21 Download gff for
FMO06510.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19918223..19918366 | 206..349 | 98 | <- | Minus |
| arm_2R | 19918493..19918688 | 10..205 | 100 | | Minus |
