Clone FMO06515 Report

Search the DGRC for FMO06515

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:65
Well:15
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG33098-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06515.5prime Sequence

326 bp (181 high quality bases) assembled on 2008-09-24

> FMO06515.5prime
CCATAAAACAAGCTTATCAATCGAATGTCGATGGATCCATCGGTTTTTCT
AGAGGATCTGGAGCGACGTCTTCGTCGCGCCAGTTCCGCCCGCAAGCAGT
CACATACTCCCCAGCCAGCATCTCACCTGGCGGATTCGGAGGCCATGGCC
GTAATCAATGAGATATTTAATCCCTCCCTGAACCTGCCGGAGTCCAGCGG
CCCCCATTCGCTGCCCGAGGAGATGAGGGCCGATGATAATGTGGCGCCCC
ATGACCTGGACATTGCCAAGCTGGCCTATCTGAATGAAGTCTTCTCGCTC
TTCTATACTGATTGCGATGGACTGAT

FMO06515.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG33098-RF 1182 CG33098-RF 164..466 24..326 1260 94.4 Plus
CG33098-RE 1169 CG33098-RE 151..453 24..326 1260 94.4 Plus
CG33098-RC 902 CG33098-RC 31..333 24..326 1260 94.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12387705..12387928 67..290 925 94.2 Plus
3R 32079331 3R 12387595..12387637 24..66 200 97.7 Plus
Blast to na_te.dros performed on 2014-11-28 23:24:24 has no hits.

FMO06515.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:01 Download gff for FMO06515.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33098-RC 27..333 17..326 93   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:10 Download gff for FMO06515.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33098-RB 27..333 17..326 93   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:24 Download gff for FMO06515.5prime
Subject Subject Range Query Range Percent Splice Strand
CG33098-RC 27..333 17..326 93   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:24 Download gff for FMO06515.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 12387591..12387637 17..66 92 -> Plus
3R 12387705..12387926 67..288 94 -> Plus
3R 12387979..12388016 289..326 92   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:01 Download gff for FMO06515.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8213313..8213359 17..66 92 -> Plus
arm_3R 8213427..8213648 67..288 94 -> Plus
arm_3R 8213701..8213738 289..326 92   Plus