FMO06515.5prime Sequence
326 bp (181 high quality bases) assembled on 2008-09-24
> FMO06515.5prime
CCATAAAACAAGCTTATCAATCGAATGTCGATGGATCCATCGGTTTTTCT
AGAGGATCTGGAGCGACGTCTTCGTCGCGCCAGTTCCGCCCGCAAGCAGT
CACATACTCCCCAGCCAGCATCTCACCTGGCGGATTCGGAGGCCATGGCC
GTAATCAATGAGATATTTAATCCCTCCCTGAACCTGCCGGAGTCCAGCGG
CCCCCATTCGCTGCCCGAGGAGATGAGGGCCGATGATAATGTGGCGCCCC
ATGACCTGGACATTGCCAAGCTGGCCTATCTGAATGAAGTCTTCTCGCTC
TTCTATACTGATTGCGATGGACTGAT
FMO06515.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33098-RF | 1182 | CG33098-RF | 164..466 | 24..326 | 1260 | 94.4 | Plus |
CG33098-RE | 1169 | CG33098-RE | 151..453 | 24..326 | 1260 | 94.4 | Plus |
CG33098-RC | 902 | CG33098-RC | 31..333 | 24..326 | 1260 | 94.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12387705..12387928 | 67..290 | 925 | 94.2 | Plus |
3R | 32079331 | 3R | 12387595..12387637 | 24..66 | 200 | 97.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:24:24 has no hits.
FMO06515.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:01 Download gff for
FMO06515.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33098-RC | 27..333 | 17..326 | 93 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:10 Download gff for
FMO06515.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33098-RB | 27..333 | 17..326 | 93 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:00:24 Download gff for
FMO06515.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33098-RC | 27..333 | 17..326 | 93 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:00:24 Download gff for
FMO06515.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12387591..12387637 | 17..66 | 92 | -> | Plus |
3R | 12387705..12387926 | 67..288 | 94 | -> | Plus |
3R | 12387979..12388016 | 289..326 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:01 Download gff for
FMO06515.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8213313..8213359 | 17..66 | 92 | -> | Plus |
arm_3R | 8213427..8213648 | 67..288 | 94 | -> | Plus |
arm_3R | 8213701..8213738 | 289..326 | 92 | | Plus |