FMO06516.5prime Sequence
901 bp (901 high quality bases) assembled on 2008-09-24
> FMO06516.5prime
CAGTCGACATGGAGTTGGAACAAAACTTGACCGCCGCCCTGATGCAGTCG
TCGGCGGAGGAGGGCAAGTCGGAGGAGGCGTGGCCGGCGGACGCCCACCT
GCATCAGCCGGCCGAGGCGAATCAGCTCCTGCTGCCGGAGCGCTCCAGCT
GCCTGGCGGTGAAGACGTTTTTGCGCATGTGCAACCTACCATTTACGGAG
CACATCAGCGACAATGCAGAGTTTATGTCACCAGGTGGCCGGTTGACCCA
CCTGCCGCTGCTCCGTTTGGGCCCTGTCAAGACTTTTGCGGAATTCGAGC
CAATAGTGGCCCAAGTGGAGGCCGTGCAAGGCGGCAATTGCCTGGACAGT
TGGATGTCCGAGGATCAGCGCGATAACATCCGCTGTCTGGTTAGCTATGT
GGAGAATGTCTTCACCCTGGCGGAGATTCACATGAGTTTTGTGGATGAGG
TAAACTATCAACTTTACACGGCAACGCGCTGTGCAGCCGCTCATCCGTGG
CCGTTGAGTACGATTCGCCGGTTTGCCAAGCAGAAGGACGCACAGAAGAT
ACTGAAGGTCTACCGGTGGCAGGATTTGGACAACGACCAGGTAATCCAGG
AGGTGAGCATCTGTGCCGATGCGTTGATCGCTGAACTGGAGGAGGACCAG
GCGAAGAGCTATTTCGGCGGCTCACGACCTTGCAAATTGGACGCCCTGGT
CTTTGGCCATGTGGTAGCCATAATGACCACCAAGCTTCCCAACATGGAAC
TGGCCGCGGTTCTGGCCACATATCCACGTCTATTGGCCCACTGTCGCCGC
ATCGATCAGAGCCTGTTTGATGGCAACTCCTGACCAGCGCGGTGGAGGAG
CAGAAGGACGAGATGGAGTTGGAAAAAATAAAAGCAAGCTTTCTAGACCA
T
FMO06516.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5662-RB | 1082 | CG5662-RB | 70..943 | 8..880 | 4300 | 99.5 | Plus |
| CG5662-RA | 992 | CG5662-RA | 70..943 | 8..880 | 4300 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:59:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15210455..15211328 | 8..880 | 4275 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:59:22 has no hits.
FMO06516.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:58:12 Download gff for
FMO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5662-RA | 58..939 | 8..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:11 Download gff for
FMO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5662-RA | 58..939 | 8..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:03 Download gff for
FMO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5662-RA | 70..951 | 8..888 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:03 Download gff for
FMO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15210455..15211336 | 8..888 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:58:12 Download gff for
FMO06516.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15104488..15105369 | 8..888 | 99 | | Plus |
