FMO06517.5prime Sequence
1175 bp (921 high quality bases) assembled on 2008-09-24
> FMO06517.5prime
ATAAAACGAAGTTATCAGTCGACATGCCTAACGACGCGATAATCTATTCT
GGTCCCTACGAATTGGGACGCCTTCGCCGGCGTCGTGATATGCGGGTGGC
GGAGTACCTCTACAGGCGTTCCATTCGCACACGCAATGCGGATCCCGAGA
TGACCGTGTGCCGTTTTATCAAACTGCTGCTCTACTTCATCGGATTCTTT
TTCGTTCTAGGCGTATTCACAACCGGATTGGCCCTCGTGATGATTGCGAA
TCATATATATCCGGATAGGCCGGGATGCAAAAAGTTCCCCGGACTAGCAA
CCGCGCCCGGACACCATGTCGGCGATCAGAAGCAAATTATGTGGAGCCCT
AATAACATTAAGGATGTGGCTAACATACAACGCGCGATAATGCGAACGGT
GAAACGATACGGTCTCGAAGGCCCGAAGCGCCTGATGGGCTGTAACATAG
ACGACAGTTGGGGCTATATGTCCGGCACGCCGTGCATTCTAATAAAGATC
ACCCAGGCATTGGGCTTCCAGGCGGTAACCTACGATGACGCCCTAACGCT
GCCCGAGTACGCTCCGGATGAGCTATTCGACTATGTGGTGGGCCTGGGCT
CGGAGGAGCGCTTCAACCGCATCTGGGTGTCCTGCCAGGTTATTGAGCCA
AGAGTGGACATTCAGTTCGACTACATCCGGTTCGCTTCTTCGATGCCGAG
AGCTCTTCACCTCCGGCAATGTCTTTCTCAACGAGTCTTCGGACGACGAC
GGACCTACTTACAAGAGGATCCCCGCCTCAGGCGCATCATTAGTGTTCGG
TTGAGCAACATTCCCGATCAACGAGGACATCCAAATCCACTGCAAGGCGT
GGCTAAGAACATACCGCTCCATTATGGTAACGGTCAAGATGCTGGTGCGT
CTGACGGCACCGCTCATCCAACACTTCATTTGGTGCTGGACGAGTGGTAC
GAGGCAAGCTTTCTGAACCATCGTTGGCGGCCGGGCCATGTAATTGGTCC
TATCTAACCATATCTGATCCTATCCACTAGCCCTGGAGAATCCTGGTCAT
GACTATGCCTTGTATTCCACCATAACAAAACGCCCGGGGCACGAGCGTCT
GACAACCAAATGGGATTCTAGGTCTACCGAACTATACACAGGGAGCCAAG
GGCCGAAATCAAAAATTGCCCGCCC
FMO06517.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5250-RA | 1060 | CG5250-RA | 49..982 | 23..953 | 4340 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19228295..19229228 | 953..23 | 4150 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:11 has no hits.
FMO06517.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:33 Download gff for
FMO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5250-RA | 40..982 | 12..953 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:36:57 Download gff for
FMO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5250-RA | 40..982 | 12..953 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:18 Download gff for
FMO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5250-RA | 40..982 | 12..953 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:18 Download gff for
FMO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19228295..19229237 | 12..953 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:33 Download gff for
FMO06517.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15054017..15054959 | 12..953 | 97 | | Minus |
