FMO06522.5prime Sequence
730 bp (433 high quality bases) assembled on 2008-09-24
> FMO06522.5prime
AAAAAACAGACTCATCAGTCGACATGTTGCGAATGTTGCGCCACAAATGT
CGTTCCCTCGTAGATCGGAGCATGCCGTGCCTGGAGTCTTTGGTAAATGC
CTGTTCTCTATTCAAGGTCGATTGGTCCAAGAATCTGAGCCAAATCAAAA
CCCCGGCCGACTGCGTTGGCTCCAGTGTGCTCCGGCAGCACCTGTTACGC
CGCAACTACAGCAGTCAGTCTTCCGCCGATGATTGCGGGCGGCCAAAGGA
TTGCGATCAGGTATCGACCTCCAAGGGCTGTGGTCCTGCTCGGTTCAAGG
GCACCATTTGCGATGCAGTCAAGGGCGGTAAGCGCAAGAAGAAGGAAGAG
CCCAAGAAGGAAAAGTCCAACAAGCCAAAGCTGCCAGCTAAGATGAGGTC
CATGTGGTATATACCCGACTGCGAGTACGTGCCAAAGTGCGATGTGCCAG
TGCGGTACGACATCCAGCACTACCGCATATCGGACAAAGAGGCCCGCCAG
TACCAGGTGACGTGGAACGAGTGCCCCCGGTTGGTGATCAAGCCCAAGAA
GGTGTGCATCCACGCAAAGCGACCGCGTCCGAAGCCCTGCCGCCGTCAGC
GGAAGACGGTGGTGGCCACAGCCCGTCCCCACGATGCCCATGCTTTAATC
CCATGGAGTGCAAGAAGGCAGAGGACTCCTCACCCTGTCCGCGCTGGACT
CTTCCCTGCTGCAAGCCCGCCCCGTATTCC
FMO06522.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2127-RA | 1695 | CG2127-RA | 119..822 | 24..730 | 3400 | 99 | Plus |
| CG2127-RB | 1640 | CG2127-RB | 103..767 | 63..730 | 3235 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8369224..8369920 | 722..24 | 3335 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:34 has no hits.
FMO06522.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:13:03 Download gff for
FMO06522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2127-RA | 114..822 | 19..730 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:03 Download gff for
FMO06522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2127-RA | 114..822 | 19..730 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:00 Download gff for
FMO06522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2127-RA | 114..822 | 19..730 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:00 Download gff for
FMO06522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8369217..8369925 | 19..730 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:13:03 Download gff for
FMO06522.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4256722..4257430 | 19..730 | 98 | | Minus |
