FMO06523.5prime Sequence
671 bp (671 high quality bases) assembled on 2008-09-24
> FMO06523.5prime
CAGTCGACATGTCCAGTCTGCAAGATATTCCGCTTGCCGACCCCGAGGGC
CTGTCTGTGGAAGGTCCCGAGGTGGCCCCCGCTCCAAAGTCCAATTCCTT
GAAGCGCTTCTTTAAGATCAGCAAGAAGCCAATGATGCGCGACCAAGTGG
AGGATGACGACGAGACATCCTCCCAGGACAACAAGGACCTGGGAAAGTCA
AACACTATAAGTCGCTTCTTTACCCGGATGAAGGGAGCCAATAAGGATGT
TCAAGATCCTTCGAGCTCGGTGGTCGAACCCGTGGAGCAGGATAAGCCGT
TGCCGAATGCAAAGCCCACGATTAAGACATCCATTTCATCCTACTGGAAG
ATACTGTTCAACCGGCAGAAGAGCCAGCGCCAAAACGCAGCTTTAGGGCA
GACCAATGCCAATAAAGAGGATAACGAGTCTGAAGAAGTCCATGAACTGC
AACCAGTAAGCCAAGATCCCGATACCGATCCTCAGCCGACAGTCAAGGAT
GAGCACGATGAAATGGAACGTGGCACAGATCCGGAGCCACCCAACCCGAA
GCCCAACAAAAGTGTTGCCAGCAAGGCATCCGGTCAGGAGATTGTCAGTG
CCTTAGAGGGCGGCCAGCTGTCTACCAATGATCACGAGAATGCGGCTTCC
ATTGCAAGCTTTCTAGACCAT
FMO06523.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:06:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5217-RA | 974 | CG5217-RA | 110..754 | 9..653 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:06:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 19247272..19247679 | 653..246 | 2040 | 100 | Minus |
3R | 32079331 | 3R | 19247790..19248027 | 246..9 | 1190 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:06:28 has no hits.
FMO06523.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:23 Download gff for
FMO06523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5217-RA | 119..767 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:05 Download gff for
FMO06523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5217-RA | 119..767 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:10 Download gff for
FMO06523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5217-RA | 110..758 | 9..659 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:10 Download gff for
FMO06523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 19247268..19247678 | 247..659 | 99 | <- | Minus |
3R | 19247790..19248027 | 9..246 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:23 Download gff for
FMO06523.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 15072990..15073400 | 247..659 | 99 | <- | Minus |
arm_3R | 15073512..15073749 | 9..246 | 100 | | Minus |