FMO06569.5prime Sequence
590 bp (590 high quality bases) assembled on 2008-09-24
> FMO06569.5prime
CAGTCGACATGGAAACTCCACCCACTCCCACCACGACCACACCGCCATCA
TTGACAACTGAGGGCACCATGGACGACATCCAATACCTGCTGCACCTGGA
GGCGATGCGCCGTTTTCAGGAAGACAGCCGCAATGTAAAGCGCCAGGTGG
AGGAGCAAGTACGCATTTGGCTGGACGCCAAGTGTGAGTATCAGCGGGAC
TTTGGGCGGCTGGCGAGGCTCCTGAAGTGCGGAGCCCTGCAGGCGGCCGT
GGATGCCCATCGTGTATCTGATGTGAATCAAGTCGACCAGGCGGCCAAGG
ATATCGCTAGTTTGCGATCCAAACTGGGCAGTGATCTGCGTCCCGCCATT
CTGGACTCCAACGATGTGAAGCAGTGCCTGGAACATCTGAACACCACCCA
CAAACCGCGCCTAAATCTATGCCGGCAACAACGGGAGTTCGCCCAGAACC
AAGAAGCTCTAAGAAGTTTGCGTACCGCCGTCGATGGATTGGAGAATGGT
ATGGAGATGGGCATGATACAGGCAATGGACCGCCTTGTGGAGGATCTTCT
CCCACCGCGGGAAACAAACAACGCAAGCTTTCTAGACCAT
FMO06569.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dgt4-RC | 986 | CG4865-RC | 344..907 | 9..572 | 2820 | 100 | Plus |
| dgt4-RB | 1101 | CG4865-RB | 400..963 | 9..572 | 2820 | 100 | Plus |
| dgt4-RA | 729 | CG4865-RA | 87..650 | 9..572 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4114228..4114791 | 9..572 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:37:08 has no hits.
FMO06569.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:27 Download gff for
FMO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt4-RA | 79..654 | 1..578 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:26 Download gff for
FMO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt4-RA | 62..637 | 1..578 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:46 Download gff for
FMO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dgt4-RA | 79..654 | 1..578 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:46 Download gff for
FMO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4114220..4114797 | 1..577 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:27 Download gff for
FMO06569.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4008253..4008830 | 1..577 | 98 | -> | Plus |
