FMO06572.5prime Sequence
1213 bp (1035 high quality bases) assembled on 2008-09-24
> FMO06572.5prime
CAGTCGACATGGGCTTCGATATTGATAGCCAGAAGATTTGCTCGGATCTG
GAGAGCTCCGATCGACGTCTGAAGACCACAGTTCTGGATGAACTGCTCGA
TAAGTGCAAAGAAGCAACAAATTCCGAGAGTGCTGACAAAATAGCCGATG
TTTTCGATAAACTGTATCTGCATCTACTGAAATGCTACGAAGATAGATTC
GAAAGCGTTCGCTCTAAAGCCATTCAAGTGGTAAGCGCTTTTTTGTCAAG
TCTTCCGCCCACGGATTTCCACCTGATGAATGTGGTTTCAACTTTGGCGG
AGCGGATGGGAAAGGCCGAAACCGTGGAGCCCAGCGAGGAAATCCGTCTC
CTCTACATTGCGCAACTGAATTTGATGATTTGCCTGTATGAGAAAATGGA
AAATGTGGGCGTCTTCAGGGAGTGCTATCCCTTGGTGGTGAAGATTCTGA
TTAAGTCTATCAAGGATGACTATCCGGTGGTGCAGCGCGAAGGATGCTCC
GCTGTGGTTACTCTCTCTCGTTTGGCTGATACCCAGGAGTTTCGTCCCTT
TACAGAATCCATTCTGCTACCTCTTTACACAATGTTGAATCACAAGCATG
CACAGGCCAGGATATCGGCCATTCAAGCCATCGCCAGGCTGAGTCTACAC
ATGGACGCCAGTGGCGATGCAATGAGAAGGCTCTTCAATGAGGTGTCGCC
CCTACTTATGGACACCATGCCATTGGTTCGCCGTGAAGTCGGTCAGATGG
GCATTCTTATGCTAATGGAACTATTGGATCGCTATTCCTTCTTTGAGAGA
ATTCTACCGCTGGTTCTTTGTTGCCTAAAGACGAATCTCCGGAGGTTCTG
AACCACATATACCCGCAATGGGCTCAAGTGTGGCATACATATTTCAATGA
AAACGAAGCCGAGTTGTCCCAACAGGAAATAAGCGATTTGCCCGGTTGAG
AATTACCCGAAGGATGTCAGCGACCTACGATAGGATGTCGTGGATGGTGC
AACGATCTTGCGACTCTGCACTTATTACCCGGGAAACAGCGGACTGAGGA
TATGTCGCCTCCACGCCCTGAGCTTACTCTATCATTGTTTGCCCGCGAGC
TGCCATGTACTGCAGTCTTTGAGATCTCGGATTGGCCATGCTGATCGATC
ATGTGGCAAGTCATGGCCGATCGCCAAGGTGGCGAAATTGTAATGGTCGG
TCTCGTGTGCCTC
FMO06572.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31320-RA | 3431 | CG31320-RA | 650..1852 | 9..1184 | 5070 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14360103..14361137 | 1038..9 | 4710 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:48:40 has no hits.
FMO06572.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:55 Download gff for
FMO06572.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31320-RA | 650..1866 | 9..1199 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:37:51 Download gff for
FMO06572.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31320-RA | 603..1819 | 9..1199 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:19 Download gff for
FMO06572.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31320-RA | 650..1866 | 9..1199 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:19 Download gff for
FMO06572.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14359921..14361137 | 9..1199 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:55 Download gff for
FMO06572.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10185643..10186859 | 9..1199 | 95 | | Minus |