FMO06585.5prime Sequence
953 bp (788 high quality bases) assembled on 2008-09-24
> FMO06585.5prime
CAGTCGACATGACGAAGAGCAATGGCGATGTGGAGGCGGCAGCCCAGGTG
CAATCTCTGGGCGGAAAGCCCAGCAACGGACATGGCCAGCTGAATGGGAA
TGGCTATCATCAGAACGGCGGACGCAGGGATTCCAGTCAAGCCTTCACAC
CACTGCTGTCGCAGCACAATAATGGCACCACCAATGGCGAGGTGACCACT
CCGCCTCCGAGTACAGTGCTCTACGAGAGCACCCCGAGCAATAATAACGA
GTGGAAGGCCCCGGAGGATCTGGGACACCTGAAGAATGGCCTGGGCAACA
TACTGAGCAGTAATAATAATGGCACCGGCAATGGGCACAGTCTGAGCGAA
AAGTATGCCCATGAACAGGCTCCCCTGACCGGAGGTTACAAGTTGCCACC
TCGCTCCAGTGAGTCCGAGGAATCCGATTTCGATTCCGACCTCAATGGCG
GCTCCTCCGCGGAATCCAGCTCCAGTTGCGGCCTTTTCGGCTGTCGGCCC
AGGTGGGCCAGAAAATTCGCGTCCACGCACGTCTTCATGGTGGTCTTCCC
TGCTGGCCTACATCCTGCAGGGCATGTACATGACCTACTTCGTCTCTGTG
ATCACCACCATTGAGAAGCTATTCCAGATCAAGTCGAAGACCACGGGAAT
TCTGCTGAGCGCCAGTGAGATGGGTCAGATATGCACGGCCATGTTGCTGA
CCTACTTCGCCGGCAGAGGACATCGTCCGAGATGGATTGCCTGCGGCATG
GTTCTGTCTCAATCGCCGCCTTCTCCTGCGCCCTGCCGCAATTTCATCTT
CGGGAGCAGCTGATGCACTCCCGTGTAATTCTGCAGCAGACGCAGGTCTC
CCCCCCCCATAAATTCCTTCTCATCACACTGGCTGAATGCCAGCAAGAAC
CAGGTTAATCCCAATTTGTGCCTTTTGGGGTGGCAACCCAATCTCTTTCG
GCA
FMO06585.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Oatp74D-RE | 4063 | CG7571-RE | 1006..1933 | 9..938 | 4375 | 98.5 | Plus |
| Oatp74D-RD | 3658 | CG7571-RD | 601..1528 | 9..938 | 4375 | 98.5 | Plus |
| Oatp74D-RC | 3715 | CG7571-RC | 658..1585 | 9..938 | 4375 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17507897..17508816 | 9..929 | 4230 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:39:01 has no hits.
FMO06585.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:39:37 Download gff for
FMO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 618..1565 | 1..951 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:19 Download gff for
FMO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RA | 639..1586 | 1..951 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:40 Download gff for
FMO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Oatp74D-RC | 650..1597 | 1..951 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:40 Download gff for
FMO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17507889..17508836 | 1..951 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:19 Download gff for
FMO06585.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17500989..17501936 | 1..951 | 97 | | Plus |
