Clone FMO06586 Report

Search the DGRC for FMO06586

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:65
Well:86
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG32582-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06586.5prime Sequence

182 bp (182 high quality bases) assembled on 2008-09-24

> FMO06586.5prime
CAGTCGACATGGGGCAAGGAGCTAGACGAATATTGCGGGCGTCCCGCTCG
CAGATTTGCGGTAGTCTTCGAACGGGCGAAGGGTCCAGCACCTCAGCAAG
TTGTCGAAAAGGTACACATAATCATTTTTGTCCTGCAGGCACAAAAATTT
GGAAATTCTTTTATGCAAGCTTTCTAGACCAT

FMO06586.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
Rrp47-RB 1285 CG8928-RB 1132..1189 104..47 230 93.1 Minus
Rrp47-RB 1285 CG8928-RB 1044..1093 152..103 205 94 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:48:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15836295..15836450 9..164 780 100 Plus
X 23542271 X 15946096..15946153 104..47 230 93.1 Minus
X 23542271 X 15946008..15946057 152..103 205 94 Minus
Blast to na_te.dros performed on 2014-11-28 20:48:07 has no hits.

FMO06586.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:28 Download gff for FMO06586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 127..288 2..168 96   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:42 Download gff for FMO06586.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32582-RA 127..288 2..168 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 21:18:53 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:18:53 Download gff for FMO06586.5prime
Subject Subject Range Query Range Percent Splice Strand
X 15836292..15836453 2..168 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:28 Download gff for FMO06586.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 15730325..15730486 2..168 96   Plus