FMO06588.5prime Sequence
283 bp (283 high quality bases) assembled on 2008-09-24
> FMO06588.5prime
CTTATCAGTCGACATGGTCAGTTTTGAGGAAGCCGCCGAACTCGCCAAGA
ACTTCTCCAAGAAGCCCACCGACTCCGAGTTCCTGGAGTTCTACGGTCTC
TTCAAGCAGGCTACCGTTGGTGATGTGAACATCGACAAGCCCGGCATTCT
GGATCTCAAGAAGAAGGCCATGTACGAGGCCTGGAACGCCCACAAGGGTC
TCTCCAAGGATGCCGCCAAGGAGGCCTACGTGAAGGTGTACGAGAAGTAT
GCCCCCAAGTACGCCGCAAGCTTTCTAGACCAT
FMO06588.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8629-RA | 352 | CG8629-RA | 36..287 | 14..265 | 1260 | 100 | Plus |
| CG8628-RA | 429 | CG8628-RA | 71..310 | 26..265 | 810 | 89.2 | Plus |
| CG8628-RB | 408 | CG8628-RB | 50..289 | 26..265 | 810 | 89.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7127978..7128229 | 265..14 | 1260 | 100 | Minus |
| 3L | 28110227 | 3L | 7131147..7131386 | 26..265 | 810 | 89.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:49:09 has no hits.
FMO06588.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:19 Download gff for
FMO06588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8629-RA | 36..291 | 14..270 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:45 Download gff for
FMO06588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8629-RA | 32..287 | 14..270 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:37 Download gff for
FMO06588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8629-RA | 36..291 | 14..270 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:37 Download gff for
FMO06588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7127974..7128229 | 14..270 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:19 Download gff for
FMO06588.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7121074..7121329 | 14..270 | 99 | | Minus |
