FMO06589.5prime Sequence
272 bp (272 high quality bases) assembled on 2008-09-24
> FMO06589.5prime
CAGTCGACATGAAATTCATTGCTGCCGTCTGTTTGATGTTCGCCCTGGTG
GCTGTGGCCCTCGGCCTCAAGGATCCTATCTGTGGACTGCCCGCTGGTAT
TGATGGCAATGGTCTCATCAAGTGTGCCGCTTTTATACCCAGCTTCAGTT
ATCATCCCGAAACCAATTCGTGTGAAAAGTTCATCTACGGCGGATGCGGC
GGCAATGAGAACCGATTTGGAACCCAGGAGCTCTGCGAACAAAAGTGCAA
GGAAGCAAGCTTTCTAGACCAT
FMO06589.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG16712-RB | 381 | CG16712-RB | 61..306 | 9..254 | 1230 | 100 | Plus |
CG16712-RA | 359 | CG16712-RA | 61..306 | 9..254 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3696293..3696471 | 254..76 | 895 | 100 | Minus |
2L | 23513712 | 2L | 3696532..3696598 | 75..9 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:05 has no hits.
FMO06589.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:30 Download gff for
FMO06589.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16712-RA | 53..313 | 1..263 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:46 Download gff for
FMO06589.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16712-RA | 56..316 | 1..263 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:54 Download gff for
FMO06589.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16712-RA | 53..313 | 1..263 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:54 Download gff for
FMO06589.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3696294..3696471 | 76..253 | 100 | <- | Minus |
2L | 3696532..3696602 | 1..75 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:30 Download gff for
FMO06589.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3696294..3696471 | 76..253 | 100 | <- | Minus |
arm_2L | 3696532..3696602 | 1..75 | 94 | | Minus |