FMO06592.5prime Sequence
161 bp (161 high quality bases) assembled on 2008-09-24
> FMO06592.5prime
CAGTCGACATGAAGTTCTTCTCAGTCGTCACCGTCTTTGTGTTCGGTCTG
CTGGCTCTGGCCAACGCTGTTCCCCTGTCGCCCGATCCAGGAAATGTGGT
AATCAACGGGGACTGCAAATACTGCAATGTGCACGGTGGAAAGGCAAGCT
TTCTAGACCAT
FMO06592.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IM2-RA | 367 | CG18106-RA | 72..206 | 9..143 | 675 | 100 | Plus |
| IM1-RA | 361 | CG18108-RA | 75..209 | 9..143 | 405 | 86.7 | Plus |
| CG18107-RA | 281 | CG18107-RA | 77..177 | 15..115 | 235 | 82.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18386792..18386869 | 66..143 | 390 | 100 | Plus |
| 2R | 25286936 | 2R | 18386673..18386730 | 9..66 | 290 | 100 | Plus |
| 2R | 25286936 | 2R | 18384023..18384078 | 9..64 | 220 | 92.9 | Plus |
| 2R | 25286936 | 2R | 18384149..18384226 | 66..143 | 195 | 83.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:08:21 has no hits.
FMO06592.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:41 Download gff for
FMO06592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM2-RA | 62..206 | 1..143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:49 Download gff for
FMO06592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM2-RA | 67..211 | 1..143 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:45 Download gff for
FMO06592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IM2-RA | 62..206 | 1..143 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:45 Download gff for
FMO06592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18386663..18386730 | 1..66 | 94 | -> | Plus |
| 2R | 18386793..18386869 | 67..143 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:41 Download gff for
FMO06592.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14274168..14274235 | 1..66 | 94 | -> | Plus |
| arm_2R | 14274298..14274374 | 67..143 | 100 | | Plus |
