FMO06595.5prime Sequence
263 bp (263 high quality bases) assembled on 2008-09-24
> FMO06595.5prime
CAGTCGACATGCGATCTGTACTGCCGTCGGTGGGATTTCTGCTGCTCCTG
GCTCTGCTGCTCGGCTCCTCGTGCACTGAATCCGGCAGGGTGATCTACTT
CAATCAACTGAACACCACCCAAGCCCTAGAGGCGGCCAAAAACAACAGCG
ATGCCCTGGGCAAGGGAATGCTCCTTGATGTGCGCGGAAATCGCTGCCCA
CGCGGATTCGTTCGCGATCATCATGGGCGTTGCAGAAGGCGTGTCGCAAG
CTTTCTAGACCAT
FMO06595.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:07:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32695-RC | 1613 | CG32695-RC | 90..330 | 5..245 | 1190 | 99.6 | Plus |
| CG32695-RB | 512 | CG32695-RB | 22..262 | 5..245 | 1190 | 99.6 | Plus |
| CG32695-RA | 385 | CG32695-RA | 22..262 | 5..245 | 1190 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9873734..9873968 | 239..5 | 1160 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:07:56 has no hits.
FMO06595.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:33 Download gff for
FMO06595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32695-RA | 19..269 | 1..252 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:39 Download gff for
FMO06595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32695-RA | 19..269 | 1..252 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:31 Download gff for
FMO06595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32695-RA | 19..269 | 1..252 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:31 Download gff for
FMO06595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9873731..9873969 | 1..243 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:33 Download gff for
FMO06595.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9767764..9768002 | 1..243 | 97 | | Minus |
