Clone FMO06596 Report

Search the DGRC for FMO06596

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:65
Well:96
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13159-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06596.5prime Sequence

254 bp (254 high quality bases) assembled on 2008-09-24

> FMO06596.5prime
CAGTCGACATGAAGTTCTTCGCTGTCCTCGTCTGTTTCTCCGCTGTCCTG
GCCATCGCAATGGCATCTACCGCAACTACAACCAGCACTCCCACAACGCC
CTCTTCGCCCACGACGACGACGTACACCTATACTACCACCCCGACCTACC
CCACCTACACCTACACCACGGACACCACCACCACTAAGCCAATCAAGCAA
CAGCTCCTGTCCCTGCTGTTCAACAAGAAGTCCGGAGCAAGCTTTCTAGA
CCAT

FMO06596.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13159-RA 393 CG13159-RA 82..311 7..236 1150 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12375367..12375596 7..236 1150 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:15:45 has no hits.

FMO06596.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:23 Download gff for FMO06596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13159-RA 76..317 1..242 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-24 09:38:41 Download gff for FMO06596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13159-RA 73..314 1..242 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:42 Download gff for FMO06596.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13159-RA 76..317 1..242 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:42 Download gff for FMO06596.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 12375361..12375602 1..242 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:23 Download gff for FMO06596.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8262866..8263107 1..242 97   Plus