FMO06606.5prime Sequence
1140 bp (-68 high quality bases) assembled on 2008-10-01
> FMO06606.5prime
ATTAAACAAAGTTATCAGTCGACATGAGCGAGTCGAATGCCACATATGGT
GTCCACGAGGTTGAGGAGTCCAATCCGCTGGAGCAGTCGACCATTACGAT
GCTAGATGTCCTGGAACAGGAAAAGGAGCTGGAGGACGAGTACGCCGCAG
TGCTGGGCGCCTCCGATGAGAAGTCGTGCACTTACGCCAAGGGCCCCATC
GGCCGACAGGCTCTGTACTCGTGCCTCACTTGTTGCCCCGAGGCGCGCGA
GGATCTGGACAAGGCCGCAGGAGTCTGCTTGGCCTGCTCCTATCGCTGTC
ACGAGCACCACGAACTGGTGGAGCTCTATACTAAGCGGAATTTCCGCTGC
GATTGTCCCACCCAGCGTCTGGGCAAGTGCTCCCTGAACCCACAAGTCGA
GGGCGTTCAACCACGTAACGTGGGCAATCTGTATAACCAGAACTTCCAGG
GGCTGTACTGCAAGTGCAAGCGACCCTATCCCGATCCCGATCGCACCGTT
GAGGAGGTTATGCTGCAGTGCGCCATCTGCGAGGACTGGTTCCACTTGCC
GCACATGAAAGCGCCCGGCGCCAGCGACAAGTGGCTGGATGTCTGCAGCG
AAATGATTTGCGATGGCTGCATGGATGCCAAACCCTTCCTAAAAGGACTA
CACTGGATTAGCCCTGCAGCCTGTGCTATAAAGATGCGAAGGAGGACAAG
CCCGGAGGCTGACGATAGCCAGCTGAAGAACGAGTTGGCCGCAGCATCTG
CGATATCATGAAAGTTCCTGAAGGTGAATCTCAGCCAGACGAAAGGCGAA
CCCAGCCAGAAGCGCGCCAAACTGGACGATTGTCGTCGGCCCAAACCAAC
CAAGGAGCATCAGGAGCTGCTTCTGGACAATGACTGGCGAAAACCCTCTG
TCAGTGCTCCGAATGCCTGTCGCTTACAAGAACCTGCCGTGGAATTTCTG
CTGATGTCGAGAATCCGCTAAACGTACGAGATCGCGGCATGAAGCGGGCT
GAAAAAAATTCAGTTATGACAAGGAATCGGGCCCTGTCCTCCATTGACCG
GACCAGCCAATCGAATGCAATAACCGAATACAACCGCATGAAGGACAAGC
TAAAGGGAATACCTGGCCAGCATTCGCCGGCCAGCAAGAA
FMO06606.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15141-RA | 1683 | CG15141-RA | 138..1264 | 21..1140 | 4830 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 17410778..17411618 | 21..864 | 3945 | 99.2 | Plus |
| 2L | 23513712 | 2L | 17412812..17413049 | 879..1106 | 385 | 89.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:38:23 has no hits.
FMO06606.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:12 Download gff for
FMO06606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 133..1264 | 16..1140 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:35:48 Download gff for
FMO06606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 117..1246 | 16..1138 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:27 Download gff for
FMO06606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15141-RA | 133..1264 | 16..1140 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:27 Download gff for
FMO06606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 17410773..17411618 | 16..864 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:12 Download gff for
FMO06606.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 17410773..17411618 | 16..864 | 98 | -> | Plus |
