FMO06618.5prime Sequence
1005 bp (927 high quality bases) assembled on 2008-10-01
> FMO06618.5prime
CAGTCGACATGATACCCTGGATGCGGGAGAAGTTCAACGAGAAACGGGCC
AAGTGGTTGGCGCGTAGCAAGCGCAGCGGTGGTTCTCCGGCTGACGAAAG
CCCTCGGAGCAGCAGTCATAGCCACAGCCAGCGGACAGACGCCAGCGATG
CGGAGAGCCTGAGCGGATCCTCGTTGAATGTCCACACGGCGGAATCTGAA
ACGCAGACGGATGGCGGGATATCCGCTTCCAATTCGCGGCCCCTTGTGGG
CGGGGGCAGTTGCGTCCTAAGGACTCCATCGCCCGCTCGCCGACGTCGCA
TTCACCTTGAGCTACAGCTGCAGCGACGAGAGGAACGTGCTGAGCATCAG
AAGGTGGTGCCACAGGACTCGCCCACGCCCACTCACCAACAGCAGGCTAA
TGCGAAATCAGCCCATACAAATCGCCCAGGTAGCTCTACTTCTGGCGAGG
CAGACGATGCCAGCAGGCCAGGTGAATCTATCCTGGTGCGGGTAATCTGC
CCCAGCTCTCGGGTTCTTATCTTCAAAACGGACGTTAATAAGCGCCTAAA
CGAGCTGAAGAGTGAGGTGATTCTGGAACTGAGCGACGATCCCGACTCCA
TCCAGCTATTTGCCCCAGATGTGCGGCATCTTAATCCGCGATACCGTCTC
TATCGGGCGGAATACTTCGGCGGCGAGCTTAACGAGGGCGACACGCTGGC
CCAGCTAAAAGTTCGCAACAATGAGACTTTCATACTCTCCCCACGACGCA
ATACTCTGCCGCAGACTGTTTCACGGATACGTGAGGTTCCTGGCCAAATG
AGCAGCTGGTGGAGAGCGCCACCCGATACGTGCCCGTCAATTGCAACCAG
CTGCCCACATCGATATTAATGAAATCTTTCAGCAGTCGAATTATCCATAC
GATGTGGCGAAGGTGTTGATCTCTTTGGCTTCAAGCCTTTCTGCCGGCGG
TATAGGAGCTTGCCCTTATGCCTCCACGCCTTGATAGCTTATGCTTAAGC
AACGT
FMO06618.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| isopeptidase-T-3-RA | 2479 | CG11025-RA | 138..1130 | 9..1005 | 4640 | 98.4 | Plus |
| isopeptidase-T-3-RC | 2491 | CG11025-RC | 138..1142 | 9..1005 | 4510 | 97.2 | Plus |
| isopeptidase-T-3-RB | 1778 | CG11025-RB | 134..731 | 404..1005 | 2665 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19671361..19671850 | 404..891 | 2350 | 99.6 | Plus |
| 2R | 25286936 | 2R | 19670755..19671150 | 9..404 | 1980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:52:39 has no hits.
FMO06618.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:21:05 Download gff for
FMO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| isopeptidase-T-3-RA | 138..1130 | 9..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:35:36 Download gff for
FMO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| isopeptidase-T-3-RA | 137..1129 | 9..1005 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:46 Download gff for
FMO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| isopeptidase-T-3-RA | 138..1130 | 9..1005 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:46 Download gff for
FMO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19670755..19671149 | 9..403 | 100 | -> | Plus |
| 2R | 19671361..19671850 | 404..891 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:21:05 Download gff for
FMO06618.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15558260..15558654 | 9..403 | 100 | -> | Plus |
| arm_2R | 15558866..15559355 | 404..891 | 99 | -> | Plus |
