Clone FMO06624 Report

Search the DGRC for FMO06624

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:66
Well:24
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7051-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06624.5prime Sequence

323 bp (-77 high quality bases) assembled on 2008-10-01

> FMO06624.5prime
CGTTATCAATCGACATGTCCGCGTCAGTAAGAAATATATTCTCTAGCCAA
GAAAATGGGAGTATCTTTAAACGGTCCAATAACTTACACAACGAACTCAA
AAAGAAGTCCGTGGTGGTTAATCAGACACAAGCCGAAGAGTCTAAGGCTA
AGAAGAAAGATAGTACGCACTAATACAGTGTGGAAACACTTGCCGACCTG
CATTATCGATCTCATATAAAGGTTTTGGAAAAAATCTATGGCGAGGAGGT
TGATATGACACCTAACTCAATCCGAGATGACACCTATGTGGAGCTATTCA
AGAAATACAACCTAAATGTCATG

FMO06624.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:57:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dic61B-RA 2616 CG7051-RA 192..501 14..323 1295 94.5 Plus
Dic61B-RB 2642 CG7051-RB 276..527 72..323 1050 94.4 Plus
Dic61B-RB 2642 CG7051-RB 192..249 14..71 245 94.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:57:28
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 152121..152272 223..72 670 96.1 Minus
3L 28110227 3L 151968..152071 323..220 400 92.3 Minus
3L 28110227 3L 152341..152398 71..14 245 94.8 Minus
Blast to na_te.dros performed 2014-11-28 19:57:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\mini-me 4622 Dpse\mini-me DPSEMINIME 4622bp 905..981 136..214 110 65 Plus

FMO06624.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:20:23 Download gff for FMO06624.5prime
Subject Subject Range Query Range Percent Splice Strand
Dic61B-RA 185..501 4..323 93   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:35:41 Download gff for FMO06624.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7051-RA 185..501 4..323 93   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:16 Download gff for FMO06624.5prime
Subject Subject Range Query Range Percent Splice Strand
Dic61B-RA 185..501 4..323 93   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:16 Download gff for FMO06624.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 151968..152069 222..323 92 <- Minus
3L 152123..152272 72..221 96 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:20:23 Download gff for FMO06624.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 151968..152069 222..323 92 <- Minus
arm_3L 152123..152272 72..221 96 <- Minus