FMO06629.5prime Sequence
711 bp (711 high quality bases) assembled on 2008-10-01
> FMO06629.5prime
TGTTATCAGTCGACATGAAGGATAAGATGAGCCTGAACCGGAGCCGGGAC
AGAGACATCACCGCACACCAGCCGCTGCTCGACAACGATCGCCACAGCCC
CAATCACAATCATTCCATTGCCATACCCAATTCGAATTCCAACTCCAACG
AGTACCATCAGCATCCACACAACGATCGCACGTACCTCGTGGAGTGTCCC
AACGGCAACTCGCTGATCAATAGCGGCAGTCAGGTGGCCAATACCATAGC
TGGGACCATGTCGGCGGCAGCGGCAGCAGCATCCCGCCACAGCGGCACCA
AGTACTCCAAGCTGGAGAACGCCCTGGACAGTCCCAGTCACTATGGGCAG
ACGCATCACGGCGGCATGGACAGTCCGAGTCATAGGTACGTGGGCGAAAC
AGTGTCCATACAGCAGCGTATGATCCAGGGACAGGATGAGCAGCTAGACA
TGATCAGCGATTCGATTGGTACCCTCAAGACGGTCTCGCGGCAAATTGGC
GTTGAGCTCGATGAGCAGGCCGTCATGCTAGACGACTTTGGGAACGAGTT
CGATACCACGGAGTCCAAGTTGGATACGACCATGAAGAAAGTTGCCAAAG
TCTTGCACATGAATAATGATAAACGACAGTGGGCCGCCATTCTCATCCTA
TCCCGGACTGTTATTGTTTGTGATAATTTTGTTTATTATTTTGGCAAGCT
TTCTAGACCAT
FMO06629.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:27:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx6-RD | 1982 | CG7736-RD | 682..1359 | 15..693 | 3370 | 99.9 | Plus |
| Syx6-RB | 1361 | CG7736-RB | 431..1108 | 15..693 | 3370 | 99.9 | Plus |
| Syx6-RE | 1945 | CG7736-RE | 787..1464 | 15..693 | 3370 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:27:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11221026..11221629 | 15..618 | 3020 | 100 | Plus |
| 2R | 25286936 | 2R | 11221783..11221857 | 618..693 | 330 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:27:07 has no hits.
FMO06629.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:54 Download gff for
FMO06629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RE | 782..1475 | 8..703 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:36:12 Download gff for
FMO06629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RD | 675..1368 | 8..703 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:02:05 Download gff for
FMO06629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx6-RE | 782..1475 | 8..703 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:02:05 Download gff for
FMO06629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11221021..11221629 | 8..618 | 99 | -> | Plus |
| 2R | 11221784..11221868 | 619..703 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:54 Download gff for
FMO06629.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7108526..7109134 | 8..618 | 99 | -> | Plus |
| arm_2R | 7109289..7109373 | 619..703 | 94 | | Plus |
