FMO06635.5prime Sequence
1163 bp (959 high quality bases) assembled on 2008-10-01
> FMO06635.5prime
TATAAAACAAAGTTATCAGTCGACATGGACATTTCGCAAATGCGCCGCGT
TTGCAGGGACGAATCCGACTGCCTGTTGGATATATATACAGAGCCATATG
CCTCCTCCAATCGGGTCCAGGAGCAGGAGCCGGTCTTGGCCACAATGCTG
AGGGAATGCAGCGGATGCAGCGTGCATAAGGAGGACGGAATGCCGCAGTT
CATCTGCGTGGAGTGTGCGGAGGCCGTAAGAAATGCCTATCGGCTAAGAC
GGCAATGCCGAAAGAGCCATCAGTACTTTGAACAGCTGCGTCTGATGATG
AAGGAGCTGGACGATATAGAGTATTGCCTGAATATAGGGGATAACATAGA
ACCACAGATGCCGGTCTCGGTAATGGAAGCTGGTAAAACGCCGGAGACAT
CCGAACCTCTTTTAGTTGAGCTTGTGCAGGTTAAGTACATGCCTCCAGAG
CCGAAGCCAATATCTTCTCCTCTTCCAGACAACAATGAGCATAAGCTCGC
GCAAAGTTATTCTCCAGCAAAGACGCCACACAATAAGTCCAAGAGGAGGG
CGAGATCCTACTCGGACAATGACTCATGGAGCCCGGATAGTGAGCTTGAA
CACGAAGATGATGATAAAATCTGGAACGCCTCAAAACGGGGCAAACCGAA
AAGGGTTCCCGGACCATATCGGTGCAAGCTCTGCACACAGTCGTTCACCC
AAAAACAAAACCTAGAGATTCACATGCGCATACATACTGGCGAGCGACCC
TACAGTGCTCCCTATGTCCGCGATCCTTTGCCCAGAAGGGCAACCTGCAG
AGCCACACACGTTGTCACACCGGCGAGCGTCCCTTCGGTTGTCCGACTGC
CCCAAGCGCTTCCGGCAGTTGGGCAACTGCAAGTCCACACCCGGACTCAT
ACTGGCGAACAGCCGTTCAAATGTTCCAAATGTCAGCAAAGCTTCAAGCA
CTAACGTCTACAAAACCCATGTCAGCACCCACGCTAGGAAGCGACGGACG
AACATCAAGAAACAAAAGAAATAGTTTAAGCTAGCTTTCTTGACCATTCG
TTTGGCGCGCGGGACCAGGTTAGTGACATAATCAAAATCATATCATATCT
AATCCCAACTAGCTAAGAGATCTGGTCATGACTTAGGCTGGAATTCCCAC
CAATAAAAAGCCG
FMO06635.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:38:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17359-RA | 1352 | CG17359-RA | 70..1085 | 25..1029 | 4700 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:38:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13998254..13999182 | 950..25 | 4480 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:38:20 has no hits.
FMO06635.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:34:10 Download gff for
FMO06635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17359-RA | 61..1091 | 16..1037 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:35:28 Download gff for
FMO06635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17359-RA | 56..1086 | 16..1037 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:26 Download gff for
FMO06635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17359-RA | 61..1091 | 16..1037 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:26 Download gff for
FMO06635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13998181..13999192 | 20..1017 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:34:10 Download gff for
FMO06635.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13991281..13992292 | 20..1017 | 97 | <- | Minus |
