FMO06640.5prime Sequence
741 bp (741 high quality bases) assembled on 2008-10-01
> FMO06640.5prime
CGATAAGGAGGCCAGAGATGTCCTGAGCAACATCCTCAAGCTGACGGGCT
TTTGGTTGAGGAACCAGCCAGGTGTGCCAACGAGGATCTGCTTATCCTGC
TTGCTGGATCTGAACGATGCCATCGCATTCCGGGAGCGCTGCATCAGGAC
CAATTCGTCTTGGTTCGAAAAGCAGGGCAAACAAGAGGATTCGGACACTG
AGACTGCAAGGGAAGGCGGGAATAACAGGTTAGAAAGTAGGGTGGATGTT
ATGCCCATTAGTATTGCACAGCCGCAAAGGAGAAGGATTCTACCACAACG
CAGCAAGAAAGTGGATGGAGTGCCTCTTAAGACAGTAGAAACCCCAATTT
ACCCTTTAGTTGTCCCGGAAATACCGCCTGCCGATCTCGTCGATCCTCTC
CGGTGCGAGGATCCTATTCAGGTGAAGAGCGAGCCTCAGCTTTCATCTGA
TTATCCAGTGGAGTCCATGAATCACGAAGAGCCAGCATCCGAAATGCCCC
AAGTCATGAAGGAAGAGCCCAGAACACTACAAAGTCATCGGGGAAGTACA
GAAAAACCGAAAGAAAACCGAGGAGCAAAGGGTGCTTAGAGGAGTGTCCT
GGCAAGGACATGGCTAAAATAGAGAATATTGACTCAACTACCAATAAGAC
CAAAGAGGAAAAGTATGCCACACGAAACAAATGGGGAGCTGCCAAAAGAG
CCTATGCACTGTAGCACCGACTATATTTCTGCGATCATGCG
FMO06640.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17806-RA | 1613 | CG17806-RA | 151..882 | 1..734 | 3605 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17802329..17803006 | 734..55 | 3285 | 99.6 | Minus |
| 3R | 32079331 | 3R | 17803056..17803110 | 55..1 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:37:53 has no hits.
FMO06640.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:52 Download gff for
FMO06640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17806-RA | 151..890 | 1..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:34 Download gff for
FMO06640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17806-RA | 120..859 | 1..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:11 Download gff for
FMO06640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17806-RA | 151..890 | 1..741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:11 Download gff for
FMO06640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17802321..17803005 | 56..741 | 99 | <- | Minus |
| 3R | 17803056..17803110 | 1..55 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:52 Download gff for
FMO06640.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13628043..13628727 | 56..741 | 99 | <- | Minus |
| arm_3R | 13628778..13628832 | 1..55 | 100 | | Minus |
