Clone FMO06643 Report

Search the DGRC for FMO06643

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:66
Well:43
Vector:pMK33-CFH-BD
Associated Gene/TranscriptMlp84B-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06643.5prime Sequence

498 bp (498 high quality bases) assembled on 2008-10-01

> FMO06643.5prime
AAGAGTGTCTACGCTGCCGAAGAGCGTCTGGCTGGCGGCTATGTATTCCA
CAAGAACTGCTTCAAGTGCGGAATGTGCAACAAATCCCTGGACTCCACCA
ACTGCACAGAGCACGAGCGCGAGCTCTACTGCAAGACGTGCCACGGTCGC
AAGTTCGGGCCGAAAGGTTACGGCTTCGGCACTGGAGCTGGCACCCTCTC
CATGGACAACGGGTCACAGTTCCTGCGCGAGAACGGCGATGTGCCGTCCG
TAAGGAATGGAGCCCGCCTGGAACCCAGGGCTATTGCTCGTGCCCCCGAA
GGTGAGGGCTGTCCTCGTTGCGGTGGCTATGTGTACGCCGCCGAACAGAT
GTTAGCCCGCGGTCGCAGCTGGCACAAGGAGTGCTTCAAGTGCGGTACCT
GCAAGAAGGGTCTGGACTCGATCCTGTGCTGCGAGGCTCCGGACAAGAAC
ATCTACTGCAAGGGCTGCTATGCCCAAGAAGTTTGGACCCAAGGCTAT

FMO06643.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
Mlp84B-RC 3071 CG1019-RC 210..702 1..494 2445 99.8 Plus
Mlp84B-RB 2382 CG1019-RB 193..685 1..494 2445 99.8 Plus
Mlp84B-RA 2399 CG1019-RA 210..702 1..494 2445 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:41
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 7115219..7115711 494..1 2420 99.8 Minus
2R 25286936 2R 24075451..24075586 73..208 245 78.7 Plus
Blast to na_te.dros performed on 2014-11-28 20:20:42 has no hits.

FMO06643.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:21 Download gff for FMO06643.5prime
Subject Subject Range Query Range Percent Splice Strand
Mlp84B-RA 210..707 1..498 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:31 Download gff for FMO06643.5prime
Subject Subject Range Query Range Percent Splice Strand
Mlp84B-RA 209..706 1..498 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:54 Download gff for FMO06643.5prime
Subject Subject Range Query Range Percent Splice Strand
Mlp84B-RA 210..707 1..498 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:54 Download gff for FMO06643.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 7115214..7115711 1..498 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:21 Download gff for FMO06643.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2940936..2941433 1..498 99   Minus