FMO06643.5prime Sequence
498 bp (498 high quality bases) assembled on 2008-10-01
> FMO06643.5prime
AAGAGTGTCTACGCTGCCGAAGAGCGTCTGGCTGGCGGCTATGTATTCCA
CAAGAACTGCTTCAAGTGCGGAATGTGCAACAAATCCCTGGACTCCACCA
ACTGCACAGAGCACGAGCGCGAGCTCTACTGCAAGACGTGCCACGGTCGC
AAGTTCGGGCCGAAAGGTTACGGCTTCGGCACTGGAGCTGGCACCCTCTC
CATGGACAACGGGTCACAGTTCCTGCGCGAGAACGGCGATGTGCCGTCCG
TAAGGAATGGAGCCCGCCTGGAACCCAGGGCTATTGCTCGTGCCCCCGAA
GGTGAGGGCTGTCCTCGTTGCGGTGGCTATGTGTACGCCGCCGAACAGAT
GTTAGCCCGCGGTCGCAGCTGGCACAAGGAGTGCTTCAAGTGCGGTACCT
GCAAGAAGGGTCTGGACTCGATCCTGTGCTGCGAGGCTCCGGACAAGAAC
ATCTACTGCAAGGGCTGCTATGCCCAAGAAGTTTGGACCCAAGGCTAT
FMO06643.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mlp84B-RC | 3071 | CG1019-RC | 210..702 | 1..494 | 2445 | 99.8 | Plus |
Mlp84B-RB | 2382 | CG1019-RB | 193..685 | 1..494 | 2445 | 99.8 | Plus |
Mlp84B-RA | 2399 | CG1019-RA | 210..702 | 1..494 | 2445 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7115219..7115711 | 494..1 | 2420 | 99.8 | Minus |
2R | 25286936 | 2R | 24075451..24075586 | 73..208 | 245 | 78.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:20:42 has no hits.
FMO06643.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:44:21 Download gff for
FMO06643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp84B-RA | 210..707 | 1..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:31 Download gff for
FMO06643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp84B-RA | 209..706 | 1..498 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:54 Download gff for
FMO06643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mlp84B-RA | 210..707 | 1..498 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:54 Download gff for
FMO06643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7115214..7115711 | 1..498 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:44:21 Download gff for
FMO06643.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2940936..2941433 | 1..498 | 99 | | Minus |