FMO06648.5prime Sequence
812 bp (-73 high quality bases) assembled on 2008-10-01
> FMO06648.5prime
ATAAAAGGCACCTTATCAGTCGACATGACGACCATGTCGCCCCCTTCCCC
CATGGACGCCTTGTGCCGCGTGTGCCACACAGCATCGCCGCGCTGCCTGC
CGCTCTTCAAACCGCTCGACGATCCAATTTCCGGCAAACCAGCGACGCTG
GCCAGCATTTTAAGCTACTGCAGCGGTCTGGAGATCCTAGAGGCGGAGCT
CTTCCTGCCCCACCACATCTGCCCGGACTGCGTGGCCAAGTTGCGGCTCT
CGCTGGAATTCAAGCGGAGTGTCCATCGCATGGACAGAATTCTGCGGCAG
AGTCATGCGGACTTTTGCCGCAGCAAAAAGATCAGCGCGGTGAATACTAG
GGCCAGGCTGTCAACCGAGATTCCGGAGGATTTTGTACTCGTGCTCGATG
ACCAGGAAGTGACTGAATATCCAGCAGAAACGATACGAGATGAGGAGCAA
CTCCTGGTCGTAGAATCAGATGAGGCGGAGAGCCGGCTGGAAGCGCCAAT
TGTACAGGAGGAGAGGCTGGATATTGCACTGGAACAGCACGAAGACGATC
TCTGCGAGATTGTCGACGATCCGGATCCGGAGCAACGTAGGAGCAGGTTA
GAAAGATCCGAGCCAGCGCTGCAATGTCCCATTTGCGGCAAACAACTGGC
TAGGAAGCGGACCTTTCAGTACCACATGAGGCTACATGGCCAGCCAAAAA
TTCGCCAAGAAGACACGACCACTGCATTGAGAGTGCCTCCAAGTGGAGCC
CGTTTGCAGGCCAAAGCTGGCGAAGATGTCTACGAGATTGTGGAGAAATC
AGCACAGACTTC
FMO06648.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2712-RA | 1804 | CG2712-RA | 96..887 | 24..812 | 3855 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2732564..2733170 | 24..630 | 3005 | 99.7 | Plus |
| X | 23542271 | X | 2733231..2733415 | 631..812 | 775 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:56:53 has no hits.
FMO06648.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:19:58 Download gff for
FMO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2712-RA | 90..887 | 16..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:38 Download gff for
FMO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2712-RA | 181..978 | 16..812 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:56 Download gff for
FMO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2712-RA | 90..887 | 16..812 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:56 Download gff for
FMO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2732558..2733170 | 16..630 | 99 | -> | Plus |
| X | 2733231..2733415 | 631..812 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:19:58 Download gff for
FMO06648.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2626591..2627203 | 16..630 | 99 | -> | Plus |
| arm_X | 2627264..2627448 | 631..812 | 98 | | Plus |
