FMO06649.5prime Sequence
899 bp (570 high quality bases) assembled on 2008-09-29
> FMO06649.5prime
CAGTCGACATGACAAGTCATCATCATCACGTCGGCGTCGGAGGGAACTTC
CAGCCTCATCTGCGTCAGATACGAGCGCCCATCGTGAAGAATCTATCGCT
GGCCGCTGCGGCGGTACCGTTGCCCCTGCACTCCGCCCCGTCGTCGGCAT
ACTTCGCTCATGCTCACCAGCCTACGGCGGCTACCATAGTCTAGCAAGAT
CCGTACACCGTTTTGGCGGGCGATCCGATGGGCGAGGAAAGCGAGAGCTT
CCTGATCGAGGAGATCATCGACGACTATGATGATGAGGCTAATATCGTCG
TACACTCAGGCGAATTCTTTGAGCACTATGAATACTATCCGGTGGATCGG
CTGGACAGACTTACCTCGGTCACGGTGGCTACGGCAGATGCACTGCCGCC
GCCGATCATCATGCAGCAGACCAGCGACGATGACGAATTCATCGAGGAGG
ATGGACAGCAGATGACATCCTCCTGGGATGGCGATGGCGATGAGGATGAT
GAGGCTACCGCGCCGGCTACGACAAATGCCTTCGAGATTGCCTCCGAGAT
GCTAACCACCATCGAGGCCACGAAGATCAAGGAGGATCAGCTCGAGAGCG
ACTTCTATATGAAGGCGACCGAGGATTCAAACAGTTCAAATGGCCGCCTG
CAGGATTTTAACCTATTTGGGAAGCAGTCGCGTGAGAGGCCCATGGGAAA
TTCATCGGCCAAGCGCTGGATGCAAACAAAGGTACCCATACGCATAACGC
AGGATGAGTTCATTGTCACCCTTTGGTCCTCGCTCACTCGGAGGATGAGG
ACGAGGAGGATGAGTTGTGAGGGAACCACCTGGTTGTGCTTGCACAATCC
GTGACGTCCTCCTCCGCCGCTCCAAATGAATGATCCCCCAGCATTGCCA
FMO06649.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:15:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| phol-RB | 3384 | CG3445-RB | 648..1534 | 9..894 | 3900 | 96.5 | Plus |
| phol-RA | 3139 | CG3445-RA | 648..1534 | 9..894 | 3900 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:15:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9454653..9455539 | 894..9 | 3750 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:15:36 has no hits.
FMO06649.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:16 Download gff for
FMO06649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phol-RA | 640..1537 | 1..898 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-29 11:27:53 Download gff for
FMO06649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phol-RA | 615..1512 | 1..898 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:30 Download gff for
FMO06649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| phol-RA | 640..1537 | 1..898 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:30 Download gff for
FMO06649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9454650..9455547 | 1..898 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:16 Download gff for
FMO06649.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9447750..9448647 | 1..898 | 96 | | Minus |
