FMO06651.5prime Sequence
1167 bp (888 high quality bases) assembled on 2008-10-01
> FMO06651.5prime
AACAAACTTATCAGTCGACATGGCCGTGCAGCTGAAACACAGCTACCACC
ACCTGCCCCTGACGATCACGCCAATCCTGCAGCAGACGCACCTCCTGCCG
CAACAGGCACCCAATCCACCCCAGCAGCAACCGCAGCAGCCACAGCCGCC
GGATCTCACCTTCCACTGCATGTGCTGTGCGGAGTTCTTCGTCCATCCGC
TGGCGCTGTACCAGCACATGAACACCCTGCACCCCCATGAGCCGGGCAAT
GGACAGCAAGAGCAGGAGAGCCCGGGCGACGAGAGCGAGGACTACAGCTG
GATATTCGAGCCGGTGTGCGAGCTGGCGGAGGATGGCAGCGACTCGTCGG
ATGGGAGCGCCTCCTCGGGCTCCGACAGCTCCTCGTCGTCGGACGACGAC
GATGACGATGACGACGACGACAGCAGCAGCTCCAGTTCGAGTTCCAGCAA
CTCGAGCTCATCAAGCAGCTCGGTGCCGACCACCAGCAACTCCAATACCC
AGCAGAGCCAGGAGTCAGTGCAGCCACTTCACGGCCTGGTTGCCGGTCCG
GGCTACAATGAGTTCCAGCTGCAGATGACAGATCCGCGGGAGTCCACCTC
CATATTCATGGTGCAGCCGACCGTAAGCGTCACGCCCTTGCAGCAGCTAC
TACCACCGGCACCCACTGTTAGCCCGGGATTGGGCCCTGCAAATCGACGC
CCATCAAGCGGGCGGCGCGGAAGAGCGGAACAACATCGGTGCACCCGTGA
TGGATCCAGCGTTGAAATGGCAACCAGAATGCTTCCAGTGCACGCACTGC
GAGGCGAGCTTTCCCAACGCCGGCGATCTGTCCAAGCACGTGCGCTCGCA
CATCAACAACAAGCCGTTCCAGTGCTTCATCTGCCAGAAGACATTCACGC
ACATCGGCAAGCCTGAACACGCACATCCGCATTCACAGGCGGCGAGAAGC
TGTACAAATGCTAGTCTCTGCCCGAAGGGCCTTCACCGCAGTCCAGCAGA
CTAGATGGTGCAATTGCCTCTGCGATTCGGGCGGCAAGCCGCATCATGGG
TGGCAGTGCGACAAGGGATTCATCACGTACAAGCTCGCTGCTGGTGACAC
CAAAGAACGCCAATCGCGCCAGAAGACGTTCATCTGTTCCGGAAGTCAAC
GCAATTCAGGGGGAAGG
FMO06651.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12299-RA | 3310 | CG12299-RA | 436..1547 | 20..1143 | 4735 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10737888..10738949 | 20..1093 | 4300 | 96.4 | Plus |
Blast to na_te.dros performed 2014-11-28 19:51:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G2 | 3102 | G2 G2 3102bp | 2528..2599 | 842..910 | 127 | 68.1 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 115..173 | 81..140 | 126 | 70 | Plus |
| TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9145..9203 | 81..140 | 126 | 70 | Plus |
FMO06651.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:53 Download gff for
FMO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12299-RA | 436..1555 | 20..1152 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:31:24 Download gff for
FMO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12299-RA | 434..1553 | 20..1152 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:26 Download gff for
FMO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12299-RA | 436..1555 | 20..1152 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:26 Download gff for
FMO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10737888..10739007 | 20..1152 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:53 Download gff for
FMO06651.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10737888..10739007 | 20..1152 | 95 | | Plus |
