FMO06655.5prime Sequence
1135 bp (-73 high quality bases) assembled on 2008-10-01
> FMO06655.5prime
TATAAAAAGAAGTTATCAGTCGACATGGCGCACTCTGACATATGTGCTTT
ACAGACGACCACTGCTGACCAGGATCAGGGAACGTCTTCAAGGGACAGCA
ATGTTCCCAAGCCGTCTTTGCCCAACATCTACCCACTTGGAACGACAAGA
ACTTCACAAGCTCAATCAACGACGATGACTTTGGAACAATACCGCCTCCA
GCTGTATAACTATGCACTCAATATTGAACGACTACGCTGCCCCCAATATG
GTGGGACGGGTGGCAGTGGAGCTAGTGCTCCTTGGTTGCATTTAAGCCCC
TACGGACACCATGGCTCAGGCAGTCTTCCATCAGTTAATCGAATGGCCGC
TCTTTCAACAATTTCCCTCTTCCCACAAACGCAACGCATTTTTCAACCTG
AGGAGCCTAAACCGCAACACAGCTATATTGGTTTGATTGCCATGGCCATA
TTGAGCTCAACTGATATGAAGTTGGTTCTCTCAGACATTTATCAATATAT
TTTGGATAATAATCCTTACTTTAGAAGTCGGGGGCCGGGATGGAGAAACT
CCATCAGGCACAATCTCTCTCTAAATGATTGCTTTATCAAATCTGGACGA
AGTGCAAATGGCAAAGGGCACTACTGGGCAATACATCCAGCCAACATGGA
GGATTTTCGCAAAGGGGATTTTAGACGTCGCAAGGCGCAGCGTAGGTCCG
AAAGCATATGGGTCTATCGGTGGATGACGCAGCACTGACTCGCCCAGCCC
GCCGCCTTTGGATCTTACAACTCCACCCCACCGAGTTCCCAGTCTGCTCT
GCAACTATCTGCCCTGGGGTTTCCATACCACCAGCACTATATCGGCCAAT
TCTTTAACAGGAGCTCAGCACCTGGTATGACGCATTATTCCCCACCAGAT
CCAGCCTTGTAATGCAACGACAAGAGGGGAATAACTAAATCAGACAATCC
ACAACTCAGCTCAGCAGCTACATCCCATCATCAGCACTTGGCCTATATCA
ACTCCACCCGGACAACACCATCGCGAATATGTTTCCCGAAGCGGACGCCA
GTTTGAAATGGCCTCGCTACTGGCACCCGAGGTCAATCGTGATTGCTCCT
GAAAACAGGAGTCCTAGTTTCGCTACCTTCGGAAA
FMO06655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fd102C-RA | 2324 | CG11152-RA | 302..1375 | 25..1084 | 4800 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 4 | 1348131 | 4 | 837935..839008 | 1084..25 | 4520 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:29:22 has no hits.
FMO06655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:32:12 Download gff for
FMO06655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd102C-RA | 290..1387 | 12..1093 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:32:43 Download gff for
FMO06655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11152-RA | 1..1086 | 25..1093 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:04 Download gff for
FMO06655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fd102C-RA | 290..1387 | 12..1093 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:04 Download gff for
FMO06655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 4 | 837923..839020 | 12..1093 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:32:12 Download gff for
FMO06655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_4 | 858549..859646 | 12..1093 | 96 | | Minus |
