FMO06659.5prime Sequence
554 bp (554 high quality bases) assembled on 2008-09-29
> FMO06659.5prime
TGCAGATTGACGAGATGCTGGGCGACTTCAACAGAATGAACAAGCGTCAG
TCGCTGTACCAGGTGCTGAGCTTCGCCATGATCGTCTCCTCGGCGCTGAT
GATCTGGAAGGGCCTGATGGTGGTCACCGGCAGCGAGTCGCCGATCGTTG
TCGTGCTCAGTGGCAGCATGGAGCCGGCTTTCCACCGCGGCGACCTCCTC
TTCCTCACTAACTACAAGGAGGAGCCGGTGCGCGTCGGCGAGATCGTCGT
CTTCAAGGTGGAGGGCAGGGACATACCCATTGTACACCGCGTCATCAAGC
TGCACGAAAAAGAGGACGGATCCGTCAAGTTCCTGACCAAGGGCGACAAT
AACAACGTGGACGACCGGGGCCTGTATGCACCCAACCAGCTGTGGCTGAC
CAAAAAGGACATTGTGGGCCGGGCCAGGGGCTTCCTGCCTTACGTGGGCA
TCATCACGATCTTCATGAACGAATATCCCAAGGTTAAGTGGGCCATTCTC
TCTATTTTGGCCATTTTCGTGCTGCTGCATCGGGAGGCAAGCTTTCTAGA
CCAT
FMO06659.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| twr-RA | 855 | CG2358-RA | 167..702 | 1..536 | 2680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6658165..6658427 | 48..310 | 1315 | 100 | Plus |
| 3R | 32079331 | 3R | 6659003..6659180 | 311..488 | 890 | 100 | Plus |
| 3R | 32079331 | 3R | 6658048..6658097 | 1..50 | 250 | 100 | Plus |
| 3R | 32079331 | 3R | 6659240..6659289 | 487..536 | 250 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:08:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 5786..5861 | 380..455 | 110 | 65.8 | Plus |
FMO06659.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:50 Download gff for
FMO06659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twr-RA | 167..702 | 1..536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-29 11:27:50 Download gff for
FMO06659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spase18-21-RA | 167..702 | 1..536 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:54 Download gff for
FMO06659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| twr-RA | 167..702 | 1..536 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:54 Download gff for
FMO06659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6658048..6658097 | 1..50 | 100 | -> | Plus |
| 3R | 6658168..6658427 | 51..310 | 100 | -> | Plus |
| 3R | 6659003..6659180 | 311..488 | 100 | -> | Plus |
| 3R | 6659242..6659289 | 489..536 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:50 Download gff for
FMO06659.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2484725..2484902 | 311..488 | 100 | -> | Plus |
| arm_3R | 2484964..2485011 | 489..536 | 100 | | Plus |
| arm_3R | 2483890..2484149 | 51..310 | 100 | -> | Plus |
| arm_3R | 2483770..2483819 | 1..50 | 100 | -> | Plus |
