FMO06668.5prime Sequence
440 bp (440 high quality bases) assembled on 2008-10-01
> FMO06668.5prime
CAGTCGACATGAAGTTAACTTATATTTTGTTAATCTGCGCTTTTGTGGCC
GCCTCCGCTGCCAGCGATCCGAAAGTGAAGATTGGCATTAAGAAGCGGGT
GGAGAACTGCACCCGGAAGGCCAAGGGCGGCGATCTCGTCCACGTGCACT
ACAGAGGAGCACTGCAGGATGGAACAGAGTTCGATAGCAGCTACTCCCGC
GGCACTCCCTTCTCCTTTACCCTGGGAGCTCGGCAGGTGATCAAGGGCTG
GGATCAGGGAATCCTTGGTATGTGTGAGGGTGAGCAGCGAAAGCTGACGA
TTCCGCCTGAGCTGGGATACGGAGCCAGTGGAGCGGGTGGCGGAAAGATT
CCCCCCAATGCGGTGCTCGTCTTCGATACGGAGTTGGTAAAAATCGAACC
GCGCTCTGGATCTGAAGAGCTGGCAAGCTTTCTAGACCAT
FMO06668.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14715-RA | 640 | CG14715-RA | 62..475 | 9..422 | 2070 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11674492..11674758 | 156..422 | 1335 | 100 | Plus |
| 3R | 32079331 | 3R | 11674282..11674429 | 9..156 | 740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:42:42 has no hits.
FMO06668.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:20 Download gff for
FMO06668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14715-RA | 62..481 | 9..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:30:55 Download gff for
FMO06668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14715-RA | 64..483 | 9..428 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:37 Download gff for
FMO06668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14715-RA | 62..481 | 9..428 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:37 Download gff for
FMO06668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11674492..11674764 | 156..428 | 99 | | Plus |
| 3R | 11674282..11674428 | 9..155 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:20 Download gff for
FMO06668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7500004..7500150 | 9..155 | 100 | -> | Plus |
| arm_3R | 7500214..7500486 | 156..428 | 99 | | Plus |
