FMO06671.5prime Sequence
652 bp (411 high quality bases) assembled on 2008-09-29
> FMO06671.5prime
GTCATCGAGAATTGCGCTAGAGATCTATATATCGCTGCGCCAGGTGAAAG
TGTACCAAACTGCACTGAAGGTACCGGCCGAACTTAAGTCACACATGGGC
GAGGATACGTTCCATAAGGCGCGGAAATATGGTCTGGACCAGGAGAAATT
CGGCATCTTCAAAGCTGTTGTTATGGATGTGGCCCTGCTTTGCATGGAGC
TGTACATCGGACTGATCGCTGTGCTCTGGCAGCTGTCCGTCCAGGTGGTG
GATAAACTGCAATGGGACTCCAAAAACGAGATCATCGTCAGCTGCGTTTT
TGTGCTCATATCGAATGTATTGAGCACTTTCAAGGGACTGCCCTTCAAGA
TCTACTAGATATTCGTGCTGGAGGAGACGCATGGTTTTAACAAACAAACA
GCGAGATTCTTCGCCTGGGATCAGCTCAAAGGCTTCCTAGTCACCCAGGT
CCTCATGATTCCCATCACAGCGGCTATTATCTTCCTCGTGCTACGCGGCG
GCGACAACTTTTTTCATATGGCTGTGGATCTTCACAGGCGTTATCTCGCT
GGTTCTACTCACTTTGTATCCGATTTTCATTGCTCCCCCTGTTCGACAAG
TATACTCCGCTGGAGAATGGTGCTCTGAGGCAATCGATTGAGGATCTTGG
CC
FMO06671.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ste24a-RA | 1547 | CG9000-RA | 131..774 | 1..647 | 3070 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17001017..17001622 | 647..40 | 2850 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:16:35 has no hits.
FMO06671.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:41 Download gff for
FMO06671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ste24a-RA | 131..778 | 1..652 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-29 11:28:03 Download gff for
FMO06671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9000-RA | 116..763 | 1..652 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:18 Download gff for
FMO06671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ste24a-RA | 131..778 | 1..652 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:18 Download gff for
FMO06671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17001013..17001618 | 44..652 | 98 | <- | Minus |
| 2R | 17001770..17001811 | 1..43 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:41 Download gff for
FMO06671.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12888518..12889123 | 44..652 | 98 | <- | Minus |
| arm_2R | 12889275..12889316 | 1..43 | 97 | | Minus |
