FMO06674.5prime Sequence
371 bp (371 high quality bases) assembled on 2008-10-01
> FMO06674.5prime
ATTAAACGAAGTTATCAGTCGACATGGAACAAAATGCGAAGCCTAAACGC
TCCTTTAAGCGTCCGTTTACCTTTCCAAAGAACTGTGTTTACCGCCCTCT
ACGTCAGATAAGCAACATGGAGCGTAGCCAGAAGCTGTCCGCCGAACAAC
CCACCTACTTCACGCTCAATGCACCGCCCTCGTTGGTTCCGGCCAAGAAG
TACTCGGATATCAGCGGTCTGCCCGCTCCTTATGCCGATCCGCACACGAA
ACTAAGGTTCGCCAGCGCCGACGAGTACGCGTCCATGCAGCACATGCCCT
CGGACATCGTCAATGGCTACCTCATGGTGCGCGGCTATACCAGCGCCGTG
GGAGCAAGCTTTCTAGACCAT
FMO06674.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12659-RC | 896 | CG12659-RC | 36..365 | 24..353 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8591306..8591502 | 353..157 | 985 | 100 | Minus |
| X | 23542271 | X | 8591562..8591694 | 156..24 | 665 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:52:17 has no hits.
FMO06674.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:18 Download gff for
FMO06674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-RC | 36..371 | 24..362 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:30:40 Download gff for
FMO06674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-RB | 298..633 | 24..362 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:24 Download gff for
FMO06674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12659-RC | 36..371 | 24..362 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:24 Download gff for
FMO06674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8591562..8591694 | 24..156 | 100 | | Minus |
| X | 8591300..8591502 | 157..362 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:18 Download gff for
FMO06674.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8485333..8485535 | 157..362 | 98 | <- | Minus |
| arm_X | 8485595..8485727 | 24..156 | 100 | | Minus |
