FMO06683.5prime Sequence
533 bp (533 high quality bases) assembled on 2008-10-01
> FMO06683.5prime
ATAAAACAAAGTTATCAGTCGACATGTCGTTGCCACGCGTTTACTTCGAT
ATAGCCGCAGGAGGTGAGAAGTTAGGTAGAATTGTGATGGAACTACGTTC
GGATGTGGTGCCCAAGACGGCGGAGAATTTCCGGGCCCTCTGCACCGGAG
AGAAGGGGTACGGCTACAAGGGATCACCATTCCACCGCGTCATCCCGAAT
TTCATGTGTCAGGGCGGTGATTTCACTAATCAAAACGGAACTGGAGGACG
CTCCATTTATGGAAACAAGTTTCCCGATGAGAATTTCGAGCTAAAGCATA
CCGGAGCTGGTGTACTTTCGATGGCCAATGCTGGGGCCAATACCAATGGA
TCTCAGTTTTTCATTTGCACCGGGAAAACCACATGGCTGGATAATAAGCA
TGTCGTGTTCGGCAAGGTCGTTGAGGGAATGGATATCGTCCAGAAGGTAG
AATCTTACGGTTCACAAGATGGGAAGACCAGCAAGAAAGTAATTATCGAA
GACTGCGGAGCCCTCGCAAGCTTTCTAGACCAT
FMO06683.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7768-RB | 679 | CG7768-RB | 88..579 | 24..515 | 2460 | 100 | Plus |
| CG7768-RA | 717 | CG7768-RA | 126..617 | 24..515 | 2460 | 100 | Plus |
| Cyp1-RA | 1227 | CG9916-RA | 287..687 | 87..487 | 745 | 79.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14218383..14218874 | 24..515 | 2460 | 100 | Plus |
| X | 23542271 | X | 16318213..16318598 | 487..102 | 730 | 79.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:52:47 has no hits.
FMO06683.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:26 Download gff for
FMO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 115..621 | 14..520 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:30:49 Download gff for
FMO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RB | 465..971 | 14..520 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:37 Download gff for
FMO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7768-RA | 116..622 | 14..520 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:37 Download gff for
FMO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14218373..14218879 | 14..520 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:26 Download gff for
FMO06683.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14211473..14211979 | 14..520 | 98 | | Plus |
