FMO06686.5prime Sequence
518 bp (518 high quality bases) assembled on 2008-10-01
> FMO06686.5prime
ATTAAACAAGGTTATCAGTCGACATGTCCGGCATTGCTATTACACGATTG
GGGGAGGAGCGCAAGGCCTGGCGCAAGGATCACCCATTCGGGTTCGTCGC
ACGACCCGCCAAGAACCCTGACGGCACCCTCAACCTGATGATCTGGGAGT
GCGCCATTCCCGGCAAGAAGTCCACCCCCTGGGAGGGCGGGCTCTACAAG
CTGCGCATGATCTTCAAGGACGACTACCCCACCTCGCCGCCCAAGTGCAA
GTTCGAACCGCCGCTGTTCCACCCGAACGTCTATCCCTCGGGCACCGTTT
GCCTGTCGCTGCTGGACGAGGAGAAGGACTGGCGCCCCGCCATCACCATC
AAGCAAATCCTGCTGGGCATCCAGGACCTGCTCAACGAGCCGAACATCAA
GGACCCGGCCCAGGCGGAGGCCTACACCATCTACTGCCAGAACCGACTGG
AGTACGAGAAGCGCGTGCGTGCCCAGGCCCGCGCCATGGCGGCCACCGAG
GCAAGCTTTCTAGACCAT
FMO06686.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:50:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lwr-RD | 1105 | CG3018-RD | 250..727 | 23..500 | 2345 | 99.4 | Plus |
| lwr-RC | 1363 | CG3018-RC | 254..731 | 23..500 | 2345 | 99.4 | Plus |
| lwr-RB | 1294 | CG3018-RB | 283..760 | 23..500 | 2345 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 541771..542248 | 500..23 | 2345 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:50:22 has no hits.
FMO06686.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:56:41 Download gff for
FMO06686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lwr-RB | 279..760 | 20..500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:29:11 Download gff for
FMO06686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lwr-RB | 271..752 | 20..500 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:38 Download gff for
FMO06686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lwr-RB | 279..760 | 20..500 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:38 Download gff for
FMO06686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 541771..542252 | 20..500 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:56:41 Download gff for
FMO06686.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 541771..542252 | 20..500 | 99 | | Minus |
