FMO06688.5prime Sequence
976 bp (-70 high quality bases) assembled on 2008-10-01
> FMO06688.5prime
AAAAAAAAAAGTTATCAGTCGACATGAACTTTGCACGCCTGATATTCGGG
CAGATGGTCCTTGGAGGACTTCGAATTCCGCGCCAGCAGACGCAGACGCA
GTGGATGATGGACCGCCGCCGATGGTTGGCCAGTGAAGCCACCTCATCGG
CTGCGGCGCCAGCTCAAGCAGCTTCTGTACCTAGAACTCAAACGCAACCG
CGGGTAAAGCCATTGCCGCTAGCCGAGGAGCGCTTGGAGTCGATACTATC
GCCCATTCGCACCAGGATCATTCGAAAGAAGCGCTTGGCCATCGATGAAC
TGTCCGCTTTGGGGTTTCTCAACACCCGTGGTTATACGACCGCCGAGGAG
TACAATCTGGAGGATCTGCAGATAGCCCTCCGCGAGCAGAACCTGTACGA
GACGAAGCGTTTCTTCTCCACAGACAATCTGGACGTGGAGCAGAATGTGC
TCTTTGTGGCGGCCAAATATCCGACGGGTCAGCAGCCGCGGGAGATATTC
TTTCTTCCGCGAGGGCTCGGTGGTCTTTTGGAACTGCAGCGACATCGAGA
CGAACAATGTGCTAAGTTTCCTGCGCGCCTTCGAAAGGGAATCGTATGTG
AGTGCTCCTGGTTCACGGGGAGAGCGAGGTGATGCCCTACACCTACATTC
CATCGACGGCGGTGGATGTGGGAGGGCGATCTGGTGGCGGAGAGCAGCGA
CTTCAATGTCACGTTACGGGTCATTCTTTCAGAATGCCAAGTTCTTTGTT
ACCGCCGATACGGATAGTTTCCTGTACCAGTTCACCTTCTCCAATGCGTG
GCCCAGTCAATAAAGCTGGGCATGTGGGAGGCGACACTGGACCGCCTACA
TAGCTCCTAAAGCTTCTCACCGAAGATCTAAGCGTGTCGCCCGATTGAAA
TCTCGCGGCGTCATTGCTGCGAAAACCGGGGAATATTTGCCTAGCGTCAT
TGGATAACCTGTCGCGAATTGCTGAT
FMO06688.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11679-RA | 1462 | CG11679-RA | 128..1073 | 23..964 | 4045 | 96.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15738008..15738827 | 845..23 | 3735 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:10 has no hits.
FMO06688.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:33 Download gff for
FMO06688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 119..1000 | 14..896 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:40 Download gff for
FMO06688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 74..955 | 14..896 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:28 Download gff for
FMO06688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11679-RA | 119..1000 | 14..896 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:28 Download gff for
FMO06688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15737955..15738841 | 11..896 | 96 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:33 Download gff for
FMO06688.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15631988..15632874 | 11..896 | 96 | <- | Minus |
