FMO06689.5prime Sequence
1114 bp (-71 high quality bases) assembled on 2008-10-01
> FMO06689.5prime
AAAAAACAAAGTTATCAGTCGACATGGGCAACAACGCCACCCCCTCGAAT
AAGAAGGTCGATGCCGCCGAGACGGTGAAGGAGTTCCTCGAGCAGGCCAA
GGAGGAGTTCGAGGACAAGTGGCGACGCAATCCGACCAACACCGCCGCCC
TCGATGACTTCGAACGGATCAAGACCCTGGGCACCGGCTCCTTTGGCCGT
GTCATGATCGTCCAGCACAAGCCCACGAAAGACTATTATGCCATGAAGAT
CCTCGACAAGCAGAAGGTGGTCAAGCTGAAGCAGGTGGAGCACACGCTGA
ACGAGAAGCGAATCCTGCAGGCCATTCAGTTCCCCTTCCTCGTCTCGCTG
CGCTACCACTTCAAGGACAACTCCAACCTTTACATGGTGCTGGAGTATGT
TCCCGGTGGCGAGATGTTCTCCCACCTGCGCAAGGTGGGCCGCTTCTCGG
AGCCGCACTCGCGCTTCTACGCGGCGCAAATCGTGCTGGCCTTCGAGTAC
CTGCACTACTTGGACCTCATCTACCGTGATCTGAAGCCGGAGAATCTGCT
GATTGACTCGCAGGGCTACCTCAAGGTGACGGACTTCGGTTTTGCCAAGC
GGGTCAAGGGACGCACCTGGACACTGTGCGGCACGCCCCGAATACCTGGC
CCCGGAGATCATTCTGTCCAAGGGCTATAACAAGGCCGTGGACTGGTGGG
CGTTGGGCGTACTCGTCTACGAAATGGCCGCCGGCTATCCGCCGTTCTTT
GCGGATCAGCCGATTCAGATCTACGAGAAGATCGTCTCCGGCAAGTGCGC
TTCCCATCGCACTTTGGCTCCGATCTGAAAGACCTACTGCGCACCTGCTG
CAGGTGGATCTGACCAAGCGCTACGGCAATCTGAAGCCGGGCGTCAATGA
TATTAGAACCAAAGTGGTTCCGCCTCCACGACTGGATGCGATCTCCAAAG
AAAATCGAAGCGCGGTCATTCCGCGTGTATGGTCCCGGCGAACGGAGCAA
TTCGATGACTACGAGGAGGAGGCGCTGCGAATGTCAGACGAGAAGGTGCA
AGGAATTGCTGAATCCCAAGCTTCTAAACATTCGTTTGGCGCGCGACCAG
GTAAATGGCTATAT
FMO06689.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pka-C1-RD | 4480 | CG4379-RD | 1264..2320 | 24..1064 | 4600 | 97 | Plus |
| Pka-C1-RC | 5312 | CG4379-RC | 1049..2105 | 24..1064 | 4600 | 97 | Plus |
| Pka-C1-RB | 5114 | CG4379-RB | 851..1907 | 24..1064 | 4600 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9696551..9697566 | 1029..24 | 4265 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:07:09 has no hits.
FMO06689.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:51 Download gff for
FMO06689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pka-C1-RB | 851..1885 | 24..1045 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:29:06 Download gff for
FMO06689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pka-C1-RC | 1045..2079 | 24..1045 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:34 Download gff for
FMO06689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pka-C1-RB | 851..1885 | 24..1045 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:34 Download gff for
FMO06689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9696532..9697566 | 24..1045 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:51 Download gff for
FMO06689.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9696532..9697566 | 24..1045 | 97 | | Minus |
