FMO06690.5prime Sequence
1131 bp (-75 high quality bases) assembled on 2008-10-01
> FMO06690.5prime
ATAAGAAAAAGTTATCAGTCGACATGCGACCCAAGGATCACCCCGATCTG
CACTTCGACGTGATTCCCAAGCTCTACGATGCCCATTCCAAGGTGTTTCT
AACCAGCTTGTGCGATGTGGATGAGCAGCTGAAACTATTGCCACGCCGAT
TCTGTCGGATGTACACCACTCGGCCACTGGCCACCCAGCTGTTTCAGTAT
CTGCAATCCCGCAAAGCGAACGTTTCGGAACAGGACTTCCTTGTGGTGGA
GGAGGGCCAGCCCTTCGCACTGCTTCTGAAAGACGGAAAACGGTTGGAAG
GGATGCTATGCTCTGGAAGTCATCTGGGACACAGCCTCATTCTGCTTATC
CGGCGGCAGCAGGGTAACAGATTGCTGTACTGCTACTCGGCTATGAGGCT
GGATAATCTTGGTCGTCTACTGGGCAACTCTGTCTTCAACTCTTGGATCG
CCCAGGGAACCGAGCAGCTGTATCTGAATCTGTCCTCTGTAAATTTGCCG
TTTGATCATATTGATTTTGATGAGATGGCACATTTCATCGAGGATCTCGG
AGCAAGAAATGACCAGAGTATGGTGCACCTGAAAGTGCCAAAATTTGGCT
ACGAGGAAATGTTATGGAGATTGGCACACACAAGTCTTCGCGGGCATATT
CATTTGGGCGACCACATTGCAAAAAGCTATGAGTGCCTTAGCATCGATCT
GGAGCGTTTTCTGGAGGAAAATTATGTACCAAGGGTTTTCGTCAGCGGTT
GCCCGACGGACTTTAATCACTATCAAAAGGTAGTTTCCTTGGATCTAAGG
AACTAAAGTGGACACCGACTCCGACCAGGATGCATCTTCGGCAGCTATGC
GCCTCTTGCGACCTCAACACATCCAGGGGATTGTCAGTTCATACGGATGG
CATTGTGCTTCCAATCCGTCATTCCTAAAGATCTTCAAGGCAAACTATTC
ACGCAGAGTGTTGCATTGGTCTCAGGATTAGGAGTGATTTCAGCAGGACA
GCCGAGCAAGGACCTTATCACGCTGTCGTCGAGGCTTGAATTGTGAACGA
TGGCACAAGCATAGTCGATGCAAGCTTTCTGACATTCATGGGCGGCGGGA
CAGTAGGTCAACCATATCTAATCTATCTAAT
FMO06690.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7341-RB | 1455 | CG7341-RB | 269..1279 | 24..1024 | 4715 | 98.4 | Plus |
| CG7341-RA | 1436 | CG7341-RA | 250..1260 | 24..1024 | 4715 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18119817..18120827 | 24..1024 | 4470 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:08:51 has no hits.
FMO06690.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:53 Download gff for
FMO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7341-RA | 242..1318 | 15..1068 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:29:04 Download gff for
FMO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7341-RB | 255..1331 | 15..1068 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:00:56 Download gff for
FMO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7341-RA | 242..1318 | 15..1068 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:00:56 Download gff for
FMO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18119809..18120885 | 15..1068 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:53 Download gff for
FMO06690.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18112909..18113985 | 15..1068 | 96 | | Plus |
