FMO06693.5prime Sequence
1086 bp (869 high quality bases) assembled on 2008-10-01
> FMO06693.5prime
AAAAGTTATCAGTCGACATGATGTCCCAAATTCCGGATTTGGCCGGCGGA
AATGGGCAACAGAAGCGAAAGATTCTGAGCGGCGGCGAATACAATAAGAT
TTGCCGGTTTATCAACGGCTTCCACGGCTTGGCCATCGACTGCGAGTTCG
AGTTGAGGAATCGCTTCTTCAGGGACGTGGAGCCAATGGCATTGACATGC
ATCCTGCAGTCGGAGCTTTTTAACCGGTCGCGTGGTCACTGGAAGCAGGA
TCAGCGCGGGAAAAGGCTTCTCAAAGCCTACGAGGAGCAGAAAAACCTAT
ACTACGACAATGCCCTACTGATCCGAATGGCTTGTGCCGAAGCACTGAAC
CCGGTGGCTCTCTGCAGGATGTTGCTGCAGGAGAAGTACAAGGATCGGCA
TCGATCGCACATCTCACAGCTTCTTAGGCATCCGCATCTTATCGACGATC
CCAAGCTGGCGGCCAATGTGCAGCAGTGCATAGTCAGCGACAATCAAGAG
GGATCCATAACGGACCTGCGACGCCGCATAGTTGGCGAGGAGTACGAGCT
TAAGCTTAAGAATCTGGCTAAGGAGGCGGGTATCCATTTCTACGACGAGA
AAGATTTGCGACGCATGGGATATGACAAGACGCCGGACATCAAGATGATC
CTGCCATTTCTTTACAAAGGCTCTGTGATCAACTGGATCGAGAGCAAGGC
CAATTTTGGGGACACCAAGGGACACAAGTCGAACATCCAACAGCAGCTGC
AAAGCTACTGCAATCGTTTGGTCCTGGATGATAATCTTATTGGTTTGGGT
ACCACGAGAAACGCCTGCGCTGCCGGATAACAACATTGGCATTACAGTAC
TCGCTGATTTCCGGCAAAGAAGATTTTGGTTTTTTATGCAACTCGCCGCA
TGAGAATACTTCCGCTGAGACTCCGACAAACGAAAGGAGGGACAGCAGTT
CCGGGAGTCACCTATGTGACGCTGATTGTCCACCAAAGAACTGAAAAAAC
TTTCAGCCAGCTTTCTAAACATTCGTTGGCGGCGCGGGTCCAGGAAATGG
TCATAATCATAACCCTAAATCATATTCTAATCACAA
FMO06693.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12713-RA | 1351 | CG12713-RA | 65..1051 | 18..1005 | 4510 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15832856..15833344 | 278..766 | 2445 | 100 | Plus |
| 3L | 28110227 | 3L | 15832528..15832787 | 18..277 | 1300 | 100 | Plus |
| 3L | 28110227 | 3L | 15833411..15833647 | 767..1005 | 455 | 86 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:20:56 has no hits.
FMO06693.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:52 Download gff for
FMO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12713-RA | 62..1058 | 15..1012 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:32:37 Download gff for
FMO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12713-RA | 66..1062 | 15..1012 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:52 Download gff for
FMO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12713-RA | 62..1058 | 15..1012 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:52 Download gff for
FMO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15832525..15832787 | 15..277 | 99 | -> | Plus |
| 3L | 15832856..15833344 | 278..766 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:52 Download gff for
FMO06693.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15825625..15825887 | 15..277 | 99 | -> | Plus |
| arm_3L | 15825956..15826444 | 278..766 | 100 | -> | Plus |
