FMO06695.5prime Sequence
558 bp (557 high quality bases) assembled on 2008-09-29
> FMO06695.5prime
CAGTCGACATGAGAGACTCGGCAGCACATGCGAGTCCGGCGGCAGCGGCA
ACGAGCACGCAGAAGTGGATCGTTTGCCGGGTTTGCCTGCAGCAGCCCAA
GGAGCCCATGGCCAGCATTTTCAACGACGATTCGGAAAAGGATCTGACCC
ACATGATTCGCGAGTGCGGCGGAGTGCCCATCAAACAGTTCGATCACTAT
CCGGACAAGATATGCGAGAAGTGCTTCAAGGTGCTGAAAATGGCATTTAA
GTTTCGAGAGACCTGCCAAAGATCGTACGGCCATCTGCGCCAGTTCGTTG
GACCCGTAGAGGTGGAGCAGCGACCACCGGAGAAAAAGGGCTCAGAGACA
GCCACCAAGCTGGAGCCGGATGTCGATCCCGATGAGGCGGAGCAGGAGCC
AGAGCATGACGAGGAAGACGAGGATGTGGACCTGGACGAGAGCCACTATG
CCGAGGCGGACGATGCCGCCGAAACGCAGGGTGGTGTCTTCCATGACGAG
ATTGAGGATGGTATCCTCGTTGAGCTGGAAAAAGGATCGGATTGTGCACG
TGAAGAAC
FMO06695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:49:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4936-RA | 1824 | CG4936-RA | 118..666 | 9..558 | 2725 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 20032165..20032542 | 180..558 | 1845 | 99.7 | Plus |
| 3R | 32079331 | 3R | 20031940..20032110 | 9..179 | 855 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:49:19 has no hits.
FMO06695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:55:26 Download gff for
FMO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4936-RA | 114..669 | 1..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-29 11:28:45 Download gff for
FMO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4936-RA | 114..669 | 1..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:44 Download gff for
FMO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4936-RA | 111..666 | 1..558 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:44 Download gff for
FMO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 20031933..20032110 | 1..179 | 98 | -> | Plus |
| 3R | 20032165..20032542 | 180..558 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:55:26 Download gff for
FMO06695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15857655..15857832 | 1..179 | 98 | -> | Plus |
| arm_3R | 15857887..15858264 | 180..558 | 99 | | Plus |
