FMO06702.5prime Sequence
800 bp (800 high quality bases) assembled on 2008-10-01
> FMO06702.5prime
CAGTCGACATGCCTTTCGCCCACGAGCAACTGAATCTGGTGGCCAGCGAG
CAGCTGAGCAAAACGGAGACCATCAAGCTGCGCAACCAGCACATCGGACA
AGCCTGCCAGCTCTTCTATCGCTCTGATCCCCTGAAAATTGTGCGCGGTC
AAGGTCAATATATGTTTGATGAGGAGGGCACCCGGTATCTGGACTGCATC
AACAATGTAGCCCACGTGGGTCATTGCCATCCGGAGGTGGTGCGAGCTGG
AGCCCTGCAGATGGCCACCATCTCGACGAACAACCGCTTCCTCCACGACG
AACTGGTCCAGTGTGCTCGCACGTTGACCAGCAAAATGCCGGAGCCTCTG
TCCGTTTGCTTCTTCGTCAATTCCGGATCCGAGGCCAATGACCTGGCCCT
TCGATTGGCCCGCAACTTTACTAAGCGTCAGGATGTTATCACTCTCGACC
ATGCCTATCATGGTCATCTGCAGTCGGTGATGGAGGTGTCTCCATACAAA
TTTAACCAGCCCGGCGGCGAGGCCAAGCCCGACTACGTGCATGTGGCGCC
GTGCCCGGACGTTTATGGCGGAAAGTTTACGGACAAGATGTATCCCGGAT
GCTGACATGGGTGCCCTGTATGCTCAGCCCATCGAGGAGATCTGCCAGAA
GCAGTTGGCCAAAGGACAGGGCGTCGCCGCCTTCATTGCCGAGAGTCTGC
AGAGTTGCGGTGGACAGATTTTTGCCACCAGCCGGATACTTCCAGGCAGT
CTACGATGCGGTACGCTCTGCCCGGAGGCGTTTGCATTGCTGACGAGGTT
FMO06702.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8745-RA | 2429 | CG8745-RA | 215..1003 | 9..800 | 3885 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13861453..13861798 | 800..452 | 1595 | 99.1 | Minus |
| 3L | 28110227 | 3L | 13861919..13862154 | 451..216 | 1180 | 100 | Minus |
| 3L | 28110227 | 3L | 13865317..13865436 | 216..97 | 600 | 100 | Minus |
| 3L | 28110227 | 3L | 13866603..13866691 | 97..9 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:58:07 has no hits.
FMO06702.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:31 Download gff for
FMO06702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8745-RA | 215..1003 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:32:09 Download gff for
FMO06702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8745-RA | 195..983 | 9..800 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:26 Download gff for
FMO06702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8745-RA | 215..1003 | 9..800 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:43:26 Download gff for
FMO06702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13861453..13861798 | 452..800 | 99 | <- | Minus |
| 3L | 13861919..13862153 | 217..451 | 100 | <- | Minus |
| 3L | 13865317..13865435 | 98..216 | 100 | <- | Minus |
| 3L | 13866603..13866691 | 9..97 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:31 Download gff for
FMO06702.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13854553..13854898 | 452..800 | 99 | <- | Minus |
| arm_3L | 13855019..13855253 | 217..451 | 100 | <- | Minus |
| arm_3L | 13858417..13858535 | 98..216 | 100 | <- | Minus |
| arm_3L | 13859703..13859791 | 9..97 | 100 | | Minus |
