Clone FMO06708 Report

Search the DGRC for FMO06708

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:67
Well:8
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7686-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06708.5prime Sequence

648 bp (-69 high quality bases) assembled on 2008-10-01

> FMO06708.5prime
CCTTTTTACGAAGTTATCAGTCGACATGGTTAAGGGCAAGAAACCGTACA
TTGACCGCAAGAAGGCGGTCACCTTCCATTTGGTGCACCGCAGTCAACAC
GATCCCCTGGTGACCGATGACAATGCTCCACAGAGGGTGCTCCTCGAGGC
AGCGGCGCGCCTTCAAAAGCCGAAGGATCCAGAGCCACCCACCGATCCCG
CCCAACGGCAGGAGGAGCTGAAGAAGTTTGGTATTCACTTCGACGATGAC
TATGATTACATGCAGCATCTGAAGAAACGTGAAAACGACGTGGTTTGGGA
GTTCATGGAGAATCCCAATCAAGCGAGAAAGCAGAAAGTCCAGGATAGTG
AGAAACCGGGCCCTGCGCCCAAGCTTATGCTGCCCACCTCGGTGTTCGCT
AGCGAGTTTGAGGAATCCGAGGGCATGCTAAACAAGGTGGGTCCTCAAAC
CTTGCGTCTCGACTGGGATCCCGATGTGGTCGCCGCCCTGGACAGCGATT
GTGAGAACGAAGAGCTGGAATATGACTTCCTATTCCAGGCCATGGACGAG
GGCGACTCCGACGACGAGGAATGGGATGACGAAGATGGGGAGGAGCATCT
GACATGGACTTCGATTCCGATGACCTAACGAGGATGAAAATGAGGACA

FMO06708.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG7686-RB 2099 CG7686-RB 79..702 26..647 2920 98.1 Plus
CG7686-RA 1660 CG7686-RA 79..702 26..647 2920 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10837967..10838588 647..28 2860 98.1 Minus
Blast to na_te.dros performed on 2014-11-28 20:32:50 has no hits.

FMO06708.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:13 Download gff for FMO06708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7686-RA 74..702 18..647 97   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:35:52 Download gff for FMO06708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7686-RA 73..701 18..647 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:59 Download gff for FMO06708.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7686-RA 74..702 18..647 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:59 Download gff for FMO06708.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 10837967..10838595 18..647 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:13 Download gff for FMO06708.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6725472..6726100 18..647 97   Minus