FMO06711.5prime Sequence
655 bp (655 high quality bases) assembled on 2008-10-01
> FMO06711.5prime
CATGATGGCCGCCCAGACGCGCATGGTCTATCAGATGAATCGATTCTGCA
CGGAGAGGGTTCAGGCCAGGATGTACAAGACGGCCACCGCCATCCGGGAG
ATCTGCAAGATCGTCCAGGTCATCCTCAAAGAGGTGGAACTGCAGGAGCC
GCGATTCATCTCCAGCCTCGTCGAGTGCAATGGCAGATTCGAGGGCGTTG
AAGTGATATCCCCGAATGAATTCGAGATAGTGCTGTATCTGAATCAAATG
GGTGTCTTCAATTTCGTGGACGATGGCACCTTGCCGGGATGTGCTGTTCT
GAAGCTGAGCGATGGAAGGAAGCGGTCCATGTCCCTGTGGGTGGAGTTCA
TAACGGCCAGTGGTTATTTGTCCTCCCGGAAGATCCGTGCCCGTTTCCAG
ACTCTGGTGGCCCAGGCGTGCGATAAAAGTGTCTACCGCGACATGGTCAA
AATGGTGGGCGACACCAGCGAGGTGAAGTTGCGCATTCGGGAGCGATTCG
TGGTCCAGATTACGCCGGCATTTAAGTGCTCAGGCATCTGGCCAAGATCG
GCGGCCCACTGGCCGGTACCACATCTCCCGTGGCCACATCCCAAACATCG
TGGCGGAGGTCAAGACCGAGGGCTTCGATCTTCTGTCCAAGGAGAGCGTC
ATCAT
FMO06711.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:37:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4766-RA | 2673 | CG4766-RA | 619..1272 | 1..655 | 3235 | 99.7 | Plus |
| mab-21-RA | 2082 | CG4746-RA | 486..1019 | 110..644 | 1135 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5999033..5999503 | 655..184 | 2310 | 99.8 | Minus |
| X | 23542271 | X | 6012163..6012696 | 644..110 | 1110 | 80.9 | Minus |
| X | 23542271 | X | 5999994..6000179 | 186..1 | 915 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:37:56 has no hits.
FMO06711.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:33:54 Download gff for
FMO06711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4766-RA | 619..1272 | 1..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:32:34 Download gff for
FMO06711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4766-RA | 619..1272 | 1..655 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:36:13 Download gff for
FMO06711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4766-RA | 619..1272 | 1..655 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:36:13 Download gff for
FMO06711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5999033..5999500 | 187..655 | 99 | <- | Minus |
| X | 5999994..6000179 | 1..186 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:33:54 Download gff for
FMO06711.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5893066..5893533 | 187..655 | 99 | <- | Minus |
| arm_X | 5894027..5894212 | 1..186 | 99 | | Minus |
