FMO06713.5prime Sequence
449 bp (449 high quality bases) assembled on 2008-10-01
> FMO06713.5prime
CAGTCGACATGGCTGGCGGTAAAGCACGCATGGATTCGGGCAAGGCCAAG
GCGAAGGCGGTATCGCGTTCCGCGCGCGCGGGTCTTCAGTTCCCCGTGGG
TCGCATCCATCGTCATCTCAAGAGCCGCACTACGTCACATGGACGCGTCG
GAGCCACTGCAGCCGTGTACTCCGCTGCCATATTGGAATACCTGACCGCC
GAGGTCCTGGAGTTGGCAGGCAACGCATCGAAGGACTTGAAAGTGAAACG
TATCACTCCTCGCCACTTACAGCTCGCCATTCGCGGAGACGAGGAGCTGG
ACAGCCTGATCAAGGCAACCATCGCTGGTGGCGGTGTCATTCCGCACATA
CACAAGTCGCTGATCGGCAAAAAGGAGGAAACGGTGCAGGATCCGCAGCG
GAAGGGCAACGTCATTCTGTCGCAGGCCTACGCAAGCTTTCTAGACCAT
FMO06713.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| His2Av-RB | 1169 | CG5499-RB | 165..587 | 9..431 | 2085 | 99.5 | Plus |
| His2Av-RA | 912 | CG5499-RA | 165..587 | 9..431 | 2085 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26868354..26868583 | 202..431 | 1150 | 100 | Plus |
| 3R | 32079331 | 3R | 26867666..26867784 | 87..205 | 595 | 100 | Plus |
| 3R | 32079331 | 3R | 26867408..26867486 | 11..89 | 365 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:07:19 has no hits.
FMO06713.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:16:57 Download gff for
FMO06713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His2Av-RA | 160..592 | 1..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:32:28 Download gff for
FMO06713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His2Av-RA | 158..590 | 1..437 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:40 Download gff for
FMO06713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His2Av-RA | 160..592 | 1..437 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:40 Download gff for
FMO06713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26867399..26867486 | 1..89 | 93 | -> | Plus |
| 3R | 26867669..26867782 | 90..203 | 100 | -> | Plus |
| 3R | 26868356..26868588 | 204..437 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:16:57 Download gff for
FMO06713.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22693121..22693208 | 1..89 | 93 | -> | Plus |
| arm_3R | 22693391..22693504 | 90..203 | 100 | -> | Plus |
| arm_3R | 22694078..22694310 | 204..437 | 99 | | Plus |
