FMO06719.5prime Sequence
648 bp (-74 high quality bases) assembled on 2008-10-01
> FMO06719.5prime
TTACGATGTTTATCAGTCGACATGTCGGAAACAGTTGATAGCTCAGAGGT
AAAGTCGCCGTCGTACGACTTATCCAAGTTCCAACTGAAGCGAATCCTAA
CCAACAACAGCGTTAGGAAAAGTATATCCCTGCTTGGCACTTTTCCGGAT
TTAGGAACCGATGATGCCATTGTTGTTTTCGAGAAAAATGCGTACCGGGA
AAGCGATGTGGCCACGGCGTCATCAGAAGAGTCTCCCAAGAAGCCTAGCT
ATTTTACCGCGGACCTGAAAGTTGACACTGAGTTTATCAACAATATCTAC
GGCAGTTTTCAGGTTGTGCCGACCCAGGATTTGTGCAGTGTGAAAAGCAC
AGTCATTTATCCCGCCACCGAGAAGCACATCGAGAAATACTCAGTATCTC
AAAAGTATCTCATCCGGGAGACTCCTGATCTCTACCAAAGAATAACTCTT
CCATATCTCACCTCAAGTCAATTCTCCCTCGAGTGGGTCTACAACATACT
CGAGCATAAGCAGGAGACGGAACGTATCATGTACGAGGACAGGGATCCAA
AGACTGGCTTTATCCTTCTGCCCGATCTCAAATGGGACGGACGCAATGTG
GAAACCCTCTATCTGCTGGGAATTGTCCACAAGCGCGACATCAAGTCT
FMO06719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2091-RA | 1335 | CG2091-RA | 98..724 | 22..648 | 3105 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5753929..5754239 | 648..338 | 1540 | 99.7 | Minus |
| 3R | 32079331 | 3R | 5754509..5754677 | 190..22 | 830 | 99.4 | Minus |
| 3R | 32079331 | 3R | 5754299..5754448 | 339..190 | 750 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:51:10 has no hits.
FMO06719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:56:53 Download gff for
FMO06719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2091-RA | 98..724 | 22..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-10-01 13:32:11 Download gff for
FMO06719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2091-RA | 97..723 | 22..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:50 Download gff for
FMO06719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2091-RA | 98..724 | 22..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:50 Download gff for
FMO06719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5753929..5754239 | 338..648 | 99 | <- | Minus |
| 3R | 5754301..5754447 | 191..337 | 100 | <- | Minus |
| 3R | 5754509..5754677 | 22..190 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:56:53 Download gff for
FMO06719.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1580023..1580169 | 191..337 | 100 | <- | Minus |
| arm_3R | 1580231..1580399 | 22..190 | 99 | | Minus |
| arm_3R | 1579651..1579961 | 338..648 | 99 | <- | Minus |
