Clone FMO06724 Report

Search the DGRC for FMO06724

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:67
Well:24
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17293-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO06724.5prime Sequence

1003 bp (966 high quality bases) assembled on 2008-10-01

> FMO06724.5prime
CAGTCGACATGAAGATAAAACTAATACATTCGGTGGTGCGCAGTTTTAAG
GTGGCCAAGATCTTCCGAGAGAACACGGACAAGATCAACGCCATCGATTT
TGCGCCCAACGGCGAACATCTAATATCCTGCAGCGAGGATGACCAGATCG
TGATCTACGACTGCGAAAAGGGGACGCAGTCGCGCACGGTGAACTCGAAG
AAGTATGGAGTGGATTTAATCCACTTTACGCACGCCAACAACACGGCCAT
CCATAGCTCCACCAAGGTGGACGACACCATACGCTATCTCAGCCTGCACG
ACAACAAATATCTGCGCTACTTCCCCGGCCACACCAAGAAGGTTATCTCG
CTGTGCATTTCGCCGGTGGAGGACACCTTTCTCTCCGGCTCGCTGGACAA
GACGCTGCGCCTGTGGGACTTGCGCTCGCCCAACTGCCAGGGACTGATGC
ATCTCTCTGGACGACCCATTGCTGCCTACGATCCCGAGGGCTTGATCTTC
GCCGCTGGCGTTAACTCGGAAAGCATTAAATTGTACGACCTTCGCTCTTT
CGACAAAGGCCCCTTCGTCACATTTAAACTTAATCAGGAGAAGGAATGCG
ACTGGACTGGCCTTAAGTTCTCCCGTGACGGCAAAACAATTCTGATCAGC
ACGAATGGATCGGTCATCCCGGCTCGTAGATGCCTTCCACGGCACTCCGC
TACAAACGTTCACGGGCTATCCAAACAACAAGGGCATTCCCATCGAGGCA
AGCTTCAGCCCAGACTCGCAGTTCATCTTTTCAGGCAGCACCGATGGACG
AGTGCACATCTGGAAATGCCGACACTGGCAATAAGGTGTCCGTACTGAAT
GAGTGAACAACCGGGACCGGTGCAATGCGTTCAGTTCCATCCAAAATACA
TGATGCTGGCGTCCGCGTGCACCAAACAGGGCTTTTTGCTGCCCCCATCC
GAAGGAGGGCTTGGCAAGCCTTTCTAGAACCATTCGTTTGGCGCGGCGGC
CCA

FMO06724.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:34
Subject Length Description Subject Range Query Range Score Percent Strand
Wdr82-RA 1089 CG17293-RA 67..1017 9..963 4540 98.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8374527..8375477 9..963 4410 98.4 Plus
Blast to na_te.dros performed on 2014-11-28 20:32:33 has no hits.

FMO06724.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:02 Download gff for FMO06724.5prime
Subject Subject Range Query Range Percent Splice Strand
Wdr82-RA 58..1022 1..969 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:21:38 Download gff for FMO06724.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17293-RA 38..1002 1..969 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:53 Download gff for FMO06724.5prime
Subject Subject Range Query Range Percent Splice Strand
Wdr82-RA 58..1022 1..969 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:53 Download gff for FMO06724.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 8374518..8375473 1..960 98 <- Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:02 Download gff for FMO06724.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8374518..8375473 1..960 98 <- Plus